RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-221ENST00000607055 CCNJLQ8IV13 435 aa21.48■■□□□ 1.03
NECAB3-221ENST00000607055 GSPT2Q8IYD1 628 aaKnown RBP21.48■■□□□ 1.03
NECAB3-221ENST00000607055 MFSD2AQ8NA29 543 aa21.48■■□□□ 1.03
NECAB3-221ENST00000607055 FAM174AQ8TBP5 190 aa21.48■■□□□ 1.03
NECAB3-221ENST00000607055 DTX3LQ8TDB6 740 aa21.48■■□□□ 1.03
NECAB3-221ENST00000607055 RUBCNQ92622 972 aa21.48■■□□□ 1.03
NECAB3-221ENST00000607055 FUBP1Q96AE4 644 aaKnown RBP21.48■■□□□ 1.03
NECAB3-221ENST00000607055 TEX101Q9BY14 249 aa21.48■■□□□ 1.03
NECAB3-221ENST00000607055 PHPT1Q9NRX4 125 aaPredicted RBP21.48■■□□□ 1.03
NECAB3-221ENST00000607055 MUC6Q6W4X9 2439 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 ZCWPW2A0A1B0GU75 182 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 CACNB4O00305 520 aaPredicted RBP21.47■■□□□ 1.03
NECAB3-221ENST00000607055 TTC4O95801 387 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 CFIP05156 583 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 PRSS56P0CW18 603 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 CA5AP35218 305 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 HOXD12P35452 270 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 MPLP40238 635 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 MAGEA4P43358 317 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 C21orf59P57076 290 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 YPEL5P62699 121 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 CDK3Q00526 305 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 NFATC2Q13469 925 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 CRYMQ14894 314 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 CCDC6Q16204 474 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 SPANXN3Q5MJ09 141 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 UNC5AQ6ZN44 842 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 CEP128Q6ZU80 1094 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 SNX20Q7Z614 316 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 TRIM74Q86UV6 250 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 IQCHQ86VS3 1027 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 GPR161Q8N6U8 529 aaKnown RBP21.47■■□□□ 1.03
NECAB3-221ENST00000607055 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.47■■□□□ 1.03
NECAB3-221ENST00000607055 GLYATL1Q969I3 302 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 HIC2Q96JB3 615 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 LGR4Q9BXB1 951 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 TSPYL1Q9H0U9 437 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 CRLS1Q9UJA2 301 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 GMEB2Q9UKD1 530 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 TMPRSS11EQ9UL52 423 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 CNOT6Q9ULM6 557 aaKnown RBP21.47■■□□□ 1.03
NECAB3-221ENST00000607055 PCDHGA5Q9Y5G8 931 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 FAM169AQ9Y6X4 670 aa21.47■■□□□ 1.03
NECAB3-221ENST00000607055 ZNF106Q9H2Y7 1883 aaKnown RBP21.46■■□□□ 1.03
NECAB3-221ENST00000607055 A0A1B0GVT2 93 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 TLR4O00206 839 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 TOR1BO14657 336 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 VILLO15195 856 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 ARNTP27540 789 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 TNFRSF8P28908 595 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 FOXN2P32314 431 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 CDKN1CP49918 316 aaPredicted RBP21.46■■□□□ 1.03
NECAB3-221ENST00000607055 THOP1P52888 689 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 CACNG1Q06432 222 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 PDE1CQ14123 709 aaPredicted RBP21.46■■□□□ 1.03
NECAB3-221ENST00000607055 DUOXA1Q1HG43 343 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 TPRG1LQ5T0D9 272 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 CAPN12Q6ZSI9 719 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 TAS2R42Q7RTR8 314 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 RABEPKQ7Z6M1 372 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 PALM2Q8IXS6 379 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 OR4L1Q8NH43 312 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 CEP76Q8TAP6 659 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 GDAP1Q8TB36 358 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 BTN2A2Q8WVV5 523 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 SKA1Q96BD8 255 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 C9orf72Q96LT7 481 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 VPS35Q96QK1 796 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 PLAC1Q9HBJ0 212 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 ARFGAP3Q9NP61 516 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 IL1RAPL1Q9NZN1 696 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 RAPGEFL1Q9UHV5 662 aa21.46■■□□□ 1.03
NECAB3-221ENST00000607055 PATE3B3GLJ2 98 aa21.45■■□□□ 1.02
NECAB3-221ENST00000607055 GOLGA8KD6RF30 607 aa21.45■■□□□ 1.02
NECAB3-221ENST00000607055 GOLGA8TH3BQL2 631 aa21.45■■□□□ 1.02
NECAB3-221ENST00000607055 SLC25A14O95258 325 aaPredicted RBP21.45■■□□□ 1.02
NECAB3-221ENST00000607055 LMNAP02545 664 aaKnown RBP21.45■■□□□ 1.02
NECAB3-221ENST00000607055 RETP07949 1114 aa21.45■■□□□ 1.02
NECAB3-221ENST00000607055 MYBL2P10244 700 aa21.45■■□□□ 1.02
NECAB3-221ENST00000607055 MYCLP1P12525 358 aaPredicted RBP21.45■■□□□ 1.02
NECAB3-221ENST00000607055 ARCN1P48444 511 aaKnown RBP21.45■■□□□ 1.02
NECAB3-221ENST00000607055 KIAA1024LP59773 190 aa21.45■■□□□ 1.02
NECAB3-221ENST00000607055 VSNL1P62760 191 aa21.45■■□□□ 1.02
NECAB3-221ENST00000607055 OVGP1Q12889 678 aa21.45■■□□□ 1.02
NECAB3-221ENST00000607055 NAA30Q147X3 362 aaPredicted RBP21.45■■□□□ 1.02
NECAB3-221ENST00000607055 NFATC4Q14934 902 aa21.45■■□□□ 1.02
NECAB3-221ENST00000607055 LONRF1Q17RB8 773 aa21.45■■□□□ 1.02
NECAB3-221ENST00000607055 GPR33Q49SQ1 333 aa21.45■■□□□ 1.02
NECAB3-221ENST00000607055 FASTKD1Q53R41 847 aaKnown RBP21.45■■□□□ 1.02
NECAB3-221ENST00000607055 STEAP4Q687X5 459 aa21.45■■□□□ 1.02
NECAB3-221ENST00000607055 PSAPL1Q6NUJ1 521 aa21.45■■□□□ 1.02
NECAB3-221ENST00000607055 DOK6Q6PKX4 331 aa21.45■■□□□ 1.02
NECAB3-221ENST00000607055 PHYKPLQ8IUZ5 450 aa21.45■■□□□ 1.02
NECAB3-221ENST00000607055 UNC5BQ8IZJ1 945 aa21.45■■□□□ 1.02
NECAB3-221ENST00000607055 SLC22A18ASQ8N1D0 253 aa21.45■■□□□ 1.02
NECAB3-221ENST00000607055 OTUD6BQ8N6M0 293 aa21.45■■□□□ 1.02
NECAB3-221ENST00000607055 EIF1ADQ8N9N8 165 aaKnown RBP21.45■■□□□ 1.02
NECAB3-221ENST00000607055 ULK4Q96C45 1275 aa21.45■■□□□ 1.02
NECAB3-221ENST00000607055 SMOC1Q9H4F8 434 aa21.45■■□□□ 1.02
NECAB3-221ENST00000607055 CATSPERZQ9NTU4 200 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms