RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 GPR63Q9BZJ6 419 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 MAGEE1Q9HCI5 957 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 TRNAU1APQ9NX07 287 aaKnown RBP12.2□□□□□ -0.46
CTSA-210ENST00000606000 LRIT1Q9P2V4 623 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 FAM153AQ9UHL3 310 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 RSPH14Q9UHP6 348 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 ZNF106Q9H2Y7 1883 aaKnown RBP12.2□□□□□ -0.46
CTSA-210ENST00000606000 ASXL3Q9C0F0 2248 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 TRBV23OR9-2A0A075B6M9 112 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 LOC285095A0A1B0GVY8 99 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 HACD1B0YJ81 288 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 D6RAR5 112 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 GPR39O43194 453 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 MTSS1O43312 755 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 BUD23O43709 281 aaKnown RBP12.19□□□□□ -0.46
CTSA-210ENST00000606000 MTX2O75431 263 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 TCEA3O75764 348 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 GLB1P16278 677 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 BPIP17213 487 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 CA5AP35218 305 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 PTPN7P35236 360 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 EIF3EP60228 445 aaKnown RBP12.19□□□□□ -0.46
CTSA-210ENST00000606000 COPS2P61201 443 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 TBC1D25Q3MII6 688 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 PLA2G4EQ3MJ16 856 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 KHDC1Q4VXA5 237 aaKnown RBP12.19□□□□□ -0.46
CTSA-210ENST00000606000 FOXR1Q6PIV2 292 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 CHST15Q7LFX5 561 aaPredicted RBP12.19□□□□□ -0.46
CTSA-210ENST00000606000 PEX26Q7Z412 305 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 SPRED1Q7Z699 444 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 C17orf82Q86X59 251 aaPredicted RBP12.19□□□□□ -0.46
CTSA-210ENST00000606000 GALNT13Q8IUC8 556 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 PRR11Q96HE9 360 aaPredicted RBP12.19□□□□□ -0.46
CTSA-210ENST00000606000 GFM1Q96RP9 751 aaKnown RBP12.19□□□□□ -0.46
CTSA-210ENST00000606000 CDH19Q9H159 772 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 GBA3Q9H227 469 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 LRRN3Q9H3W5 708 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 ATXN10Q9UBB4 475 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 ZNHIT2Q9UHR6 403 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 AMFRQ9UKV5 643 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 TMPRSS11EQ9UL52 423 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 LHX6Q9UPM6 363 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 KCNK6Q9Y257 313 aa12.19□□□□□ -0.46
CTSA-210ENST00000606000 GOLGA4Q13439 2230 aaKnown RBP12.18□□□□□ -0.46
CTSA-210ENST00000606000 TCRBV7S2A1N4TA0A589 114 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 KCNN4O15554 427 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 AGTP01019 485 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 PYGLP06737 847 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 RBP3P10745 1247 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 ACP5P13686 325 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 HGFP14210 728 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 ZNF8P17098 575 aaPredicted RBP12.18□□□□□ -0.46
CTSA-210ENST00000606000 PSMB4P28070 264 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 EIF2S3P41091 472 aaKnown RBP12.18□□□□□ -0.46
CTSA-210ENST00000606000 OR1D5P58170 312 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 DCDC1P59894 354 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 KIF5AQ12840 1032 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 XRCC4Q13426 336 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 PTPRCAPQ14761 206 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 ZNF569Q5MCW4 686 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 MICALCLQ6ZW33 695 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 ZNF761Q86XN6 746 aaPredicted RBP12.18□□□□□ -0.46
CTSA-210ENST00000606000 CDKL3Q8IVW4 592 aaPredicted RBP12.18□□□□□ -0.46
CTSA-210ENST00000606000 RAVER1Q8IY67 606 aaKnown RBP12.18□□□□□ -0.46
CTSA-210ENST00000606000 ARL14Q8N4G2 192 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 TTC30BQ8N4P2 665 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 CCDC110Q8TBZ0 833 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 NAF1Q96HR8 494 aaKnown RBP12.18□□□□□ -0.46
CTSA-210ENST00000606000 CALR3Q96L12 384 aaKnown RBP12.18□□□□□ -0.46
CTSA-210ENST00000606000 VAT1Q99536 393 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 APOL2Q9BQE5 337 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 FICDQ9BVA6 458 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 POLR1BQ9H9Y6 1135 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 RDH14Q9HBH5 336 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 EPB41L5Q9HCM4 733 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 ASCL3Q9NQ33 180 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 VPS18Q9P253 973 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 APPL1Q9UKG1 709 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 R3HDM2Q9Y2K5 976 aaKnown RBP12.18□□□□□ -0.46
CTSA-210ENST00000606000 SSUH2Q9Y2M2 353 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 EPG5Q9HCE0 2579 aa12.18□□□□□ -0.46
CTSA-210ENST00000606000 ARHGEF17Q96PE2 2063 aaPredicted RBP12.17□□□□□ -0.46
CTSA-210ENST00000606000 A0A087WV48 116 aa12.17□□□□□ -0.46
CTSA-210ENST00000606000 RGSL1A5PLK6 1076 aa12.17□□□□□ -0.46
CTSA-210ENST00000606000 PPM1DO15297 605 aa12.17□□□□□ -0.46
CTSA-210ENST00000606000 B4GAT1O43505 415 aa12.17□□□□□ -0.46
CTSA-210ENST00000606000 NUDT21O43809 227 aaKnown RBP12.17□□□□□ -0.46
CTSA-210ENST00000606000 LSSP48449 732 aa12.17□□□□□ -0.46
CTSA-210ENST00000606000 B4GALNT1Q00973 533 aa12.17□□□□□ -0.46
CTSA-210ENST00000606000 CCDC173Q0VFZ6 552 aa12.17□□□□□ -0.46
CTSA-210ENST00000606000 SLC1A5Q15758 541 aa12.17□□□□□ -0.46
CTSA-210ENST00000606000 ANKRD20A2Q5SQ80 823 aa12.17□□□□□ -0.46
CTSA-210ENST00000606000 ANKRD20A1Q5TYW2 823 aa12.17□□□□□ -0.46
CTSA-210ENST00000606000 ANKRD20A3Q5VUR7 823 aa12.17□□□□□ -0.46
CTSA-210ENST00000606000 CCDC70Q6NSX1 233 aa12.17□□□□□ -0.46
CTSA-210ENST00000606000 DARS2Q6PI48 645 aaKnown RBP12.17□□□□□ -0.46
CTSA-210ENST00000606000 CRTC3Q6UUV7 619 aa12.17□□□□□ -0.46
CTSA-210ENST00000606000 ADGRG6Q86SQ4 1221 aa12.17□□□□□ -0.46
CTSA-210ENST00000606000 TRAM1L1Q8N609 369 aa12.17□□□□□ -0.46
CTSA-210ENST00000606000 SNIP1Q8TAD8 396 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms