RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 PCDH9Q9HC56 1237 aa21.06■□□□□ 0.96
PPFIA3-209ENST00000602783 DNPEPQ9ULA0 475 aa21.06■□□□□ 0.96
PPFIA3-209ENST00000602783 INTUQ9ULD6 942 aa21.06■□□□□ 0.96
PPFIA3-209ENST00000602783 HYOU1Q9Y4L1 999 aa21.06■□□□□ 0.96
PPFIA3-209ENST00000602783 IGHV1OR21-1A0A087WYE8 117 aa21.05■□□□□ 0.96
PPFIA3-209ENST00000602783 APOL1O14791 398 aa21.05■□□□□ 0.96
PPFIA3-209ENST00000602783 HGSO14964 777 aaPredicted RBP21.05■□□□□ 0.96
PPFIA3-209ENST00000602783 JCHAINP01591 159 aa21.05■□□□□ 0.96
PPFIA3-209ENST00000602783 TNNT1P13805 278 aa21.05■□□□□ 0.96
PPFIA3-209ENST00000602783 LIMK2P53671 638 aa21.05■□□□□ 0.96
PPFIA3-209ENST00000602783 ZBTB17Q13105 803 aa21.05■□□□□ 0.96
PPFIA3-209ENST00000602783 VSIG1Q86XK7 387 aa21.05■□□□□ 0.96
PPFIA3-209ENST00000602783 DTX1Q86Y01 620 aa21.05■□□□□ 0.96
PPFIA3-209ENST00000602783 GALNT13Q8IUC8 556 aa21.05■□□□□ 0.96
PPFIA3-209ENST00000602783 LPCAT1Q8NF37 534 aa21.05■□□□□ 0.96
PPFIA3-209ENST00000602783 COX14Q96I36 57 aa21.05■□□□□ 0.96
PPFIA3-209ENST00000602783 TRIM5Q9C035 493 aa21.05■□□□□ 0.96
PPFIA3-209ENST00000602783 B3GNT4Q9C0J1 378 aa21.05■□□□□ 0.96
PPFIA3-209ENST00000602783 KCNK4Q9NYG8 393 aa21.05■□□□□ 0.96
PPFIA3-209ENST00000602783 ATP1A1P05023 1023 aaKnown RBP21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 FGF3P11487 239 aaPredicted RBP21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 MPSTP25325 297 aa21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 CD82P27701 267 aa21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 CD86P42081 329 aa21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 IFI35P80217 286 aaPredicted RBP21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 TRA2AQ13595 282 aaKnown RBP eCLIP21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 TCEAL1Q15170 157 aa21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 LINC00303Q3SY05 128 aa21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 LRRC38Q5VT99 294 aa21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 NPNTQ6UXI9 565 aa21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 RFX6Q8HWS3 928 aa21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 RHOT1Q8IXI2 618 aa21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 EXD3Q8N9H8 876 aa21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 TC2NQ8N9U0 490 aa21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 OR4D9Q8NGE8 314 aa21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 TAAR9Q96RI9 348 aa21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 ANP32EQ9BTT0 268 aa21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 MAK16Q9BXY0 300 aaKnown RBP21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 CEP41Q9BYV8 373 aa21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 ZNHIT2Q9UHR6 403 aa21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 FLNBO75369 2602 aaKnown RBP21.04■□□□□ 0.96
PPFIA3-209ENST00000602783 ZFC3H1O60293 1989 aaKnown RBP21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 SPOPO43791 374 aa21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 MMP2P08253 660 aa21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 SLC1A1P43005 524 aa21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 PPM1FP49593 454 aaPredicted RBP21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 RPL26P61254 145 aaKnown RBP21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 DYNLT1P63172 113 aa21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 AP1B1Q10567 949 aa21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 SQSTM1Q13501 440 aa21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 LRP8Q14114 963 aa21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 ODF2Q5BJF6 829 aa21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 FAM182AQ5T1J6 154 aa21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 ZNF761Q86XN6 746 aaPredicted RBP21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 JPH3Q8WXH2 748 aaPredicted RBP21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 EXTL1Q92935 676 aa21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 RNF25Q96BH1 459 aaPredicted RBP21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 OLFM3Q96PB7 478 aa21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 LYSMD1Q96S90 227 aa21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 ARHGAP9Q9BRR9 750 aa21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 DDX56Q9NY93 547 aaKnown RBP21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 TMEM9Q9P0T7 183 aa21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 RPL26L1Q9UNX3 145 aaKnown RBP21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 PRKAB1Q9Y478 270 aa21.03■□□□□ 0.96
PPFIA3-209ENST00000602783 C1orf232A0A0U1RR37 186 aa21.02■□□□□ 0.96
PPFIA3-209ENST00000602783 DNAJC6O75061 913 aa21.02■□□□□ 0.96
PPFIA3-209ENST00000602783 COMTP21964 271 aa21.02■□□□□ 0.96
PPFIA3-209ENST00000602783 CSTF2P33240 577 aaKnown RBP eCLIP21.02■□□□□ 0.96
PPFIA3-209ENST00000602783 MFSD7Q6UXD7 560 aa21.02■□□□□ 0.96
PPFIA3-209ENST00000602783 CHST15Q7LFX5 561 aaPredicted RBP21.02■□□□□ 0.96
PPFIA3-209ENST00000602783 RAVER1Q8IY67 606 aaKnown RBP21.02■□□□□ 0.96
PPFIA3-209ENST00000602783 CNTD1Q8N815 330 aa21.02■□□□□ 0.96
PPFIA3-209ENST00000602783 ZSCAN1Q8NBB4 408 aa21.02■□□□□ 0.96
PPFIA3-209ENST00000602783 AGBL5Q8NDL9 886 aa21.02■□□□□ 0.96
PPFIA3-209ENST00000602783 SLC37A2Q8TED4 501 aa21.02■□□□□ 0.96
PPFIA3-209ENST00000602783 AHCYL2Q96HN2 611 aaKnown RBP21.02■□□□□ 0.96
PPFIA3-209ENST00000602783 WDR24Q96S15 920 aa21.02■□□□□ 0.96
PPFIA3-209ENST00000602783 DPYSL5Q9BPU6 564 aa21.02■□□□□ 0.96
PPFIA3-209ENST00000602783 ZMYND15Q9H091 742 aa21.02■□□□□ 0.96
PPFIA3-209ENST00000602783 CNOT6Q9ULM6 557 aaKnown RBP21.02■□□□□ 0.96
PPFIA3-209ENST00000602783 PCDHGA4Q9Y5G9 962 aa21.02■□□□□ 0.96
PPFIA3-209ENST00000602783 PCYT1BQ9Y5K3 369 aaPredicted RBP21.02■□□□□ 0.96
PPFIA3-209ENST00000602783 OAS3Q9Y6K5 1087 aaKnown RBP21.02■□□□□ 0.96
PPFIA3-209ENST00000602783 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.01■□□□□ 0.95
PPFIA3-209ENST00000602783 STMND1H3BQB6 276 aa21.01■□□□□ 0.95
PPFIA3-209ENST00000602783 PPP1R12AO14974 1030 aaPredicted RBP21.01■□□□□ 0.95
PPFIA3-209ENST00000602783 EML2O95834 649 aa21.01■□□□□ 0.95
PPFIA3-209ENST00000602783 ITGB2P05107 769 aa21.01■□□□□ 0.95
PPFIA3-209ENST00000602783 THRAP10827 490 aa21.01■□□□□ 0.95
PPFIA3-209ENST00000602783 ZFXP17010 805 aaPredicted RBP21.01■□□□□ 0.95
PPFIA3-209ENST00000602783 WT1P19544 449 aaPredicted RBP21.01■□□□□ 0.95
PPFIA3-209ENST00000602783 CSF2RBP32927 897 aa21.01■□□□□ 0.95
PPFIA3-209ENST00000602783 MAGEA1P43355 309 aa21.01■□□□□ 0.95
PPFIA3-209ENST00000602783 FASLGP48023 281 aa21.01■□□□□ 0.95
PPFIA3-209ENST00000602783 SPINT3P49223 89 aa21.01■□□□□ 0.95
PPFIA3-209ENST00000602783 GPLD1P80108 840 aa21.01■□□□□ 0.95
PPFIA3-209ENST00000602783 PDK1Q15118 436 aa21.01■□□□□ 0.95
PPFIA3-209ENST00000602783 QPCTQ16769 361 aa21.01■□□□□ 0.95
PPFIA3-209ENST00000602783 TMEM71Q6P5X7 295 aa21.01■□□□□ 0.95
PPFIA3-209ENST00000602783 SFRP1Q8N474 314 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms