RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 C11orf16Q9NQ32 467 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 GRIP1Q9Y3R0 1128 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 PEX16Q9Y5Y5 336 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 APOC1P02654 83 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 ADRB2P07550 413 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 EARS2Q5JPH6 523 aaKnown RBP9.57□□□□□ -0.88
CSMD1-217ENST00000602723 HECTD3Q5T447 861 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 SLC9A4Q6AI14 798 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 PHF13Q86YI8 300 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-217ENST00000602723 FAM13CQ8NE31 585 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 PIK3R3Q92569 461 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 CLP1Q92989 425 aaKnown RBP9.57□□□□□ -0.88
CSMD1-217ENST00000602723 PRMT6Q96LA8 375 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-217ENST00000602723 TCF25Q9BQ70 676 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 GPSM3Q9Y4H4 160 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 PLIN3O60664 434 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 AMD1P17707 334 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 SHMT1P34896 483 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 SRSF11Q05519 484 aaKnown RBP9.57□□□□□ -0.88
CSMD1-217ENST00000602723 MFSD5Q6N075 450 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 P2RY8Q86VZ1 359 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 LRRN4Q8WUT4 740 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 GAD1Q99259 594 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 IFT46Q9NQC8 304 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 HEATR1Q9H583 2144 aaKnown RBP9.57□□□□□ -0.88
CSMD1-217ENST00000602723 EDF1O60869 148 aaKnown RBP9.57□□□□□ -0.88
CSMD1-217ENST00000602723 ASMTP46597 345 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 PPP3CAQ08209 521 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 SPPL2CQ8IUH8 684 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 AP2M1Q96CW1 435 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 SLC6A15Q9H2J7 730 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 GMIPQ9P107 970 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 MGAT4AQ9UM21 535 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 CES1P23141 567 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 DDR1Q08345 913 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 CARTPTQ16568 116 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 PYHIN1Q6K0P9 492 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 PPP1R13LQ8WUF5 828 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 TM6SF2Q9BZW4 377 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 RAB23Q9ULC3 237 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 CNOT6Q9ULM6 557 aaKnown RBP9.57□□□□□ -0.88
CSMD1-217ENST00000602723 QSOX1O00391 747 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 MPZL2O60487 215 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 ERAL1O75616 437 aaKnown RBP9.56□□□□□ -0.88
CSMD1-217ENST00000602723 MYBL2P10244 700 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 FSTL1Q12841 308 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 BTG3Q14201 252 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-217ENST00000602723 CMC1Q7Z7K0 106 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 RBM15BQ8NDT2 890 aaKnown RBP9.56□□□□□ -0.88
CSMD1-217ENST00000602723 SGK2Q9HBY8 427 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 PRH1P02810 166 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 ACTR3P61158 418 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 ZBTB6Q15916 424 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 FRMD7Q6ZUT3 714 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 DNAJA4Q8WW22 397 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-217ENST00000602723 AGXT2Q9BYV1 514 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 EQTNQ9NQ60 294 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 PRAMEF33A0A0G2JMD5 474 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 PRAMEF10O60809 474 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 ANGPTL1O95841 491 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 KIR3DL1P43629 444 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 NRG1Q02297 640 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-217ENST00000602723 MADCAM1Q13477 382 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 C1orf186Q6ZWK4 172 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 RNF31Q96EP0 1072 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 ERMAPQ96PL5 475 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-217ENST00000602723 TMPRSS4Q9NRS4 437 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 PRDM4Q9UKN5 801 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 TBL1XO60907 577 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 SCN2BO60939 215 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 FABP3P05413 133 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 SLC35G4P0C7Q5 338 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 UROSP10746 265 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 DPEP1P16444 411 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 ADORA2AP29274 412 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 PCBP1Q15365 356 aaKnown RBP eCLIP9.56□□□□□ -0.88
CSMD1-217ENST00000602723 QPCTQ16769 361 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 CA9Q16790 459 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 FAM91A1Q658Y4 838 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 FADS2P1A8MWK0 482 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 PAPSS2O95340 614 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-217ENST00000602723 SLC4A9Q96Q91 983 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 PDCD2LQ9BRP1 358 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 LRRC4CQ9HCJ2 640 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 FBXL21Q9UKT6 434 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 LRRC10BA6NIK2 292 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 HOXC6P09630 235 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 LEMD2Q8NC56 503 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 ZNF563Q8TA94 476 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 LNX1Q8TBB1 728 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-217ENST00000602723 TRNT1Q96Q11 434 aaKnown RBP9.56□□□□□ -0.88
CSMD1-217ENST00000602723 ASAH2Q9NR71 780 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 ZNF490Q9ULM2 529 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-217ENST00000602723 TCRBV5S4A2TA0A5A2 114 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 DPPA5A6NC42 116 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 ADAMDEC1O15204 470 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 AIREO43918 545 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 LGR5O75473 907 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 CTPS1P17812 591 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 STXBP1P61764 594 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms