RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 SULT1C4O75897 302 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 RBP1P09455 135 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 PRDX3P30048 256 aaKnown RBP18.26■□□□□ 0.51
UPF1-210ENST00000600689 ZBTB6Q15916 424 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 AAK1Q2M2I8 961 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 IQSEC1Q6DN90 963 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 OR10Q1Q8NGQ4 319 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 ROPN1LQ96C74 230 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 TUBB1Q9H4B7 451 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 U3KQV3 271 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 STAU1O95793 577 aaKnown RBP18.26■□□□□ 0.51
UPF1-210ENST00000600689 IMPDH1P20839 514 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 PRKACGP22612 351 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 FSHRP23945 695 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 HLCSP50747 726 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 KCNK10P57789 538 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 GPR162Q16538 588 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 NOTUMQ6P988 496 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 TFAP2DQ7Z6R9 452 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 DSG4Q86SJ6 1040 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 LRRC52Q8N7C0 313 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 OR13F1Q8NGS4 319 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 FBXO30Q8TB52 745 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 ZUFSPQ96AP4 578 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 FEM1CQ96JP0 617 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 SLC39A8Q9C0K1 460 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 CCDC68Q9H2F9 335 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 POLG2Q9UHN1 485 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 UBQLN1Q9UMX0 589 aaKnown RBP18.26■□□□□ 0.51
UPF1-210ENST00000600689 HTTP42858 3142 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 AZIN1O14977 448 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 MTSS1O43312 755 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 CNTN5O94779 1100 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 OXSR1O95747 527 aaPredicted RBP18.26■□□□□ 0.51
UPF1-210ENST00000600689 NKX2-5P52952 324 aaPredicted RBP18.26■□□□□ 0.51
UPF1-210ENST00000600689 WNT3AP56704 352 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 DAOAP59103 153 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 DGCR6Q14129 220 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 BROXQ5VW32 411 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 C8orf82Q6P1X6 216 aaPredicted RBP18.26■□□□□ 0.51
UPF1-210ENST00000600689 ISCA2Q86U28 154 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 PACRGLQ8N7B6 248 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 HOPXQ9BPY8 73 aaPredicted RBP18.26■□□□□ 0.51
UPF1-210ENST00000600689 NT5MQ9NPB1 228 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 RGS18Q9NS28 235 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 PSME2Q9UL46 239 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 SLC45A1Q9Y2W3 748 aa18.26■□□□□ 0.51
UPF1-210ENST00000600689 SUPT3HB4E1H0 165 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 CELF2O95319 508 aaKnown RBP18.25■□□□□ 0.51
UPF1-210ENST00000600689 ESRRBO95718 433 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 DARSP14868 501 aaKnown RBP18.25■□□□□ 0.51
UPF1-210ENST00000600689 LILRA4P59901 499 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 FAM110CQ1W6H9 321 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 SPRYD7Q5W111 196 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 LCN8Q6JVE9 175 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 SLC2A7Q6PXP3 512 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 DNAJC14Q6Y2X3 702 aaPredicted RBP18.25■□□□□ 0.51
UPF1-210ENST00000600689 CCDC81Q6ZN84 652 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 SPRED1Q7Z699 444 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 TLK2Q86UE8 772 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 TAC4Q86UU9 113 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 NT5C3BQ969T7 300 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 DUS3LQ96G46 650 aaKnown RBP18.25■□□□□ 0.51
UPF1-210ENST00000600689 HNRNPABQ99729 332 aaKnown RBP18.25■□□□□ 0.51
UPF1-210ENST00000600689 FUNDC2Q9BWH2 189 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 GNPTGQ9UJJ9 305 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 FAM50BQ9Y247 325 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 ZNF701M0R085 212 aaPredicted RBP18.25■□□□□ 0.51
UPF1-210ENST00000600689 TSPAN3O60637 253 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 GJB3O75712 270 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 INMTO95050 263 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 TTKP33981 857 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 OCA2Q04671 838 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 SEMA3BQ13214 749 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 PAGE2BQ5JRK9 111 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 ALKAL1Q6UXT8 129 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 CASP10Q92851 521 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 TMBIM1Q969X1 311 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 TMEM125Q96AQ2 219 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 NRBF2Q96F24 287 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 SMOQ99835 787 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 RIC8BQ9NVN3 520 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 UTS2RQ9UKP6 389 aa18.25■□□□□ 0.51
UPF1-210ENST00000600689 UBA6A0AVT1 1052 aaPredicted RBP18.24■□□□□ 0.51
UPF1-210ENST00000600689 TRIM64CA6NLI5 447 aa18.24■□□□□ 0.51
UPF1-210ENST00000600689 ENPP3O14638 875 aa18.24■□□□□ 0.51
UPF1-210ENST00000600689 F2P00734 622 aa18.24■□□□□ 0.51
UPF1-210ENST00000600689 MBL2P11226 248 aaPredicted RBP18.24■□□□□ 0.51
UPF1-210ENST00000600689 CLCQ05315 142 aa18.24■□□□□ 0.51
UPF1-210ENST00000600689 TMEM236Q5W0B7 351 aa18.24■□□□□ 0.51
UPF1-210ENST00000600689 ZNF773Q6PK81 442 aa18.24■□□□□ 0.51
UPF1-210ENST00000600689 ADAMTS16Q8TE57 1224 aa18.24■□□□□ 0.51
UPF1-210ENST00000600689 ZFP90Q8TF47 636 aa18.24■□□□□ 0.51
UPF1-210ENST00000600689 CCDC126Q96EE4 140 aa18.24■□□□□ 0.51
UPF1-210ENST00000600689 MRGPRX2Q96LB1 330 aa18.24■□□□□ 0.51
UPF1-210ENST00000600689 PARK7Q99497 189 aaKnown RBP18.24■□□□□ 0.51
UPF1-210ENST00000600689 BCAS1O75363 584 aaPredicted RBP18.24■□□□□ 0.51
UPF1-210ENST00000600689 ANXA9O76027 345 aa18.24■□□□□ 0.51
UPF1-210ENST00000600689 LBPP18428 481 aa18.24■□□□□ 0.51
UPF1-210ENST00000600689 HPCAL1P37235 193 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms