RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 TRMT1Q9NXH9 659 aaKnown RBP27.97■■■□□ 2.07
SSBP4-206ENST00000599699 NFKBIL1Q9UBC1 381 aaPredicted RBP27.97■■■□□ 2.07
SSBP4-206ENST00000599699 ZNHIT2Q9UHR6 403 aa27.97■■■□□ 2.07
SSBP4-206ENST00000599699 OAS3Q9Y6K5 1087 aaKnown RBP27.97■■■□□ 2.07
SSBP4-206ENST00000599699 B4DGG1 531 aa27.96■■■□□ 2.07
SSBP4-206ENST00000599699 SLC25A14O95258 325 aaPredicted RBP27.96■■■□□ 2.07
SSBP4-206ENST00000599699 GP1BAP07359 652 aa27.96■■■□□ 2.07
SSBP4-206ENST00000599699 ACTN2P35609 894 aa27.96■■■□□ 2.07
SSBP4-206ENST00000599699 ADCY8P40145 1251 aa27.96■■■□□ 2.07
SSBP4-206ENST00000599699 PDPK2PQ6A1A2 396 aa27.96■■■□□ 2.07
SSBP4-206ENST00000599699 CCNI2Q6ZMN8 369 aaPredicted RBP27.96■■■□□ 2.07
SSBP4-206ENST00000599699 REXO1L1PQ8IX06 675 aa27.96■■■□□ 2.07
SSBP4-206ENST00000599699 MAPK15Q8TD08 544 aa27.96■■■□□ 2.07
SSBP4-206ENST00000599699 GPBAR1Q8TDU6 330 aa27.96■■■□□ 2.07
SSBP4-206ENST00000599699 PDLIM2Q96JY6 352 aa27.96■■■□□ 2.07
SSBP4-206ENST00000599699 PLEKHG4BQ96PX9 1271 aa27.96■■■□□ 2.07
SSBP4-206ENST00000599699 ARFGAP3Q9NP61 516 aa27.96■■■□□ 2.07
SSBP4-206ENST00000599699 VPS18Q9P253 973 aa27.96■■■□□ 2.07
SSBP4-206ENST00000599699 JRKLQ9Y4A0 524 aa27.96■■■□□ 2.07
SSBP4-206ENST00000599699 EME2A4GXA9 379 aaPredicted RBP27.95■■■□□ 2.06
SSBP4-206ENST00000599699 CTBSQ01459 385 aa27.95■■■□□ 2.06
SSBP4-206ENST00000599699 LONRF2Q1L5Z9 754 aa27.95■■■□□ 2.06
SSBP4-206ENST00000599699 ZDHHC20Q5W0Z9 365 aa27.95■■■□□ 2.06
SSBP4-206ENST00000599699 SLC30A9Q6PML9 568 aa27.95■■■□□ 2.06
SSBP4-206ENST00000599699 NAT6Q93015 286 aa27.95■■■□□ 2.06
SSBP4-206ENST00000599699 RTP4Q96DX8 246 aa27.95■■■□□ 2.06
SSBP4-206ENST00000599699 SCARF2Q96GP6 870 aaPredicted RBP27.95■■■□□ 2.06
SSBP4-206ENST00000599699 LRRC40Q9H9A6 602 aa27.95■■■□□ 2.06
SSBP4-206ENST00000599699 IL17CQ9P0M4 197 aa27.95■■■□□ 2.06
SSBP4-206ENST00000599699 C2orf81A6NN90 581 aa27.94■■■□□ 2.06
SSBP4-206ENST00000599699 STX7O15400 261 aaKnown RBP27.94■■■□□ 2.06
SSBP4-206ENST00000599699 OPA1O60313 960 aa27.94■■■□□ 2.06
SSBP4-206ENST00000599699 AK4P27144 223 aaPredicted RBP27.94■■■□□ 2.06
SSBP4-206ENST00000599699 SPAM1P38567 509 aa27.94■■■□□ 2.06
SSBP4-206ENST00000599699 INSM1Q01101 510 aaPredicted RBP27.94■■■□□ 2.06
SSBP4-206ENST00000599699 CCNG2Q16589 344 aa27.94■■■□□ 2.06
SSBP4-206ENST00000599699 PYCR3Q53H96 274 aa27.94■■■□□ 2.06
SSBP4-206ENST00000599699 UNQ6494/PRO21346Q6UXR6 183 aa27.94■■■□□ 2.06
SSBP4-206ENST00000599699 NRROSQ86YC3 692 aa27.94■■■□□ 2.06
SSBP4-206ENST00000599699 PHYKPLQ8IUZ5 450 aa27.94■■■□□ 2.06
SSBP4-206ENST00000599699 CCDC89Q8N998 374 aa27.94■■■□□ 2.06
SSBP4-206ENST00000599699 GLYATL1Q969I3 302 aa27.94■■■□□ 2.06
SSBP4-206ENST00000599699 TAAR2Q9P1P5 351 aa27.94■■■□□ 2.06
SSBP4-206ENST00000599699 PRKAB1Q9Y478 270 aa27.94■■■□□ 2.06
SSBP4-206ENST00000599699 PLEKHM1Q9Y4G2 1056 aa27.94■■■□□ 2.06
SSBP4-206ENST00000599699 ARL5AQ9Y689 179 aa27.94■■■□□ 2.06
SSBP4-206ENST00000599699 PSMD3O43242 534 aa27.93■■■□□ 2.06
SSBP4-206ENST00000599699 TAF1AQ15573 450 aaPredicted RBP27.93■■■□□ 2.06
SSBP4-206ENST00000599699 ZNF648Q5T619 568 aaPredicted RBP27.93■■■□□ 2.06
SSBP4-206ENST00000599699 FAM151BQ6UXP7 276 aa27.93■■■□□ 2.06
SSBP4-206ENST00000599699 OR2AG1Q9H205 316 aa27.93■■■□□ 2.06
SSBP4-206ENST00000599699 IL26Q9NPH9 171 aa27.93■■■□□ 2.06
SSBP4-206ENST00000599699 SPATS2LQ9NUQ6 558 aaKnown RBP27.93■■■□□ 2.06
SSBP4-206ENST00000599699 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP27.93■■■□□ 2.06
SSBP4-206ENST00000599699 ZKSCAN5Q9Y2L8 839 aa27.93■■■□□ 2.06
SSBP4-206ENST00000599699 TPRP12270 2363 aaKnown RBP27.93■■■□□ 2.06
SSBP4-206ENST00000599699 ACACBO00763 2458 aa27.93■■■□□ 2.06
SSBP4-206ENST00000599699 C1QTNF9BB2RNN3 333 aa27.92■■■□□ 2.06
SSBP4-206ENST00000599699 KIF5CO60282 957 aa27.92■■■□□ 2.06
SSBP4-206ENST00000599699 PPFIA2O75334 1257 aa27.92■■■□□ 2.06
SSBP4-206ENST00000599699 C1QTNF9P0C862 333 aa27.92■■■□□ 2.06
SSBP4-206ENST00000599699 LPOP22079 712 aaPredicted RBP27.92■■■□□ 2.06
SSBP4-206ENST00000599699 MSNP26038 577 aaKnown RBP27.92■■■□□ 2.06
SSBP4-206ENST00000599699 ACTR1BP42025 376 aa27.92■■■□□ 2.06
SSBP4-206ENST00000599699 ACTR1AP61163 376 aa27.92■■■□□ 2.06
SSBP4-206ENST00000599699 PEX6Q13608 980 aa27.92■■■□□ 2.06
SSBP4-206ENST00000599699 SIX1Q15475 284 aaPredicted RBP27.92■■■□□ 2.06
SSBP4-206ENST00000599699 PERM1Q5SV97 790 aa27.92■■■□□ 2.06
SSBP4-206ENST00000599699 KCTD11Q693B1 232 aa27.92■■■□□ 2.06
SSBP4-206ENST00000599699 PDCD7Q8N8D1 485 aaKnown RBP27.92■■■□□ 2.06
SSBP4-206ENST00000599699 GDAP1Q8TB36 358 aa27.92■■■□□ 2.06
SSBP4-206ENST00000599699 GATA6Q92908 595 aa27.92■■■□□ 2.06
SSBP4-206ENST00000599699 RMI1Q9H9A7 625 aa27.92■■■□□ 2.06
SSBP4-206ENST00000599699 TRIM39Q9HCM9 518 aa27.92■■■□□ 2.06
SSBP4-206ENST00000599699 ATXN10Q9UBB4 475 aa27.92■■■□□ 2.06
SSBP4-206ENST00000599699 FEZ2Q9UHY8 353 aaPredicted RBP27.92■■■□□ 2.06
SSBP4-206ENST00000599699 GLYATL1P3A0A0U1RQE8 302 aa27.91■■■□□ 2.06
SSBP4-206ENST00000599699 DNAJC6O75061 913 aa27.91■■■□□ 2.06
SSBP4-206ENST00000599699 CRTAMO95727 393 aa27.91■■■□□ 2.06
SSBP4-206ENST00000599699 LMAN1P49257 510 aa27.91■■■□□ 2.06
SSBP4-206ENST00000599699 PTPRCAPQ14761 206 aa27.91■■■□□ 2.06
SSBP4-206ENST00000599699 CHRNA6Q15825 494 aa27.91■■■□□ 2.06
SSBP4-206ENST00000599699 ATP13A5Q4VNC0 1218 aa27.91■■■□□ 2.06
SSBP4-206ENST00000599699 DENND5AQ6IQ26 1287 aa27.91■■■□□ 2.06
SSBP4-206ENST00000599699 OGFOD3Q6PK18 319 aa27.91■■■□□ 2.06
SSBP4-206ENST00000599699 CHST15Q7LFX5 561 aaPredicted RBP27.91■■■□□ 2.06
SSBP4-206ENST00000599699 KLHDC8BQ8IXV7 354 aa27.91■■■□□ 2.06
SSBP4-206ENST00000599699 SLC35F6Q8N357 371 aa27.91■■■□□ 2.06
SSBP4-206ENST00000599699 GPR156Q8NFN8 814 aa27.91■■■□□ 2.06
SSBP4-206ENST00000599699 BRSK1Q8TDC3 778 aa27.91■■■□□ 2.06
SSBP4-206ENST00000599699 ZDHHC1Q8WTX9 485 aa27.91■■■□□ 2.06
SSBP4-206ENST00000599699 SYNDIG1Q9H7V2 258 aa27.91■■■□□ 2.06
SSBP4-206ENST00000599699 CLCA2Q9UQC9 943 aa27.91■■■□□ 2.06
SSBP4-206ENST00000599699 AKAP13Q12802 2813 aa27.9■■■□□ 2.06
SSBP4-206ENST00000599699 E7EVH7 732 aa27.9■■■□□ 2.06
SSBP4-206ENST00000599699 AP2A1O95782 977 aa27.9■■■□□ 2.06
SSBP4-206ENST00000599699 MT-CO3P00414 261 aa27.9■■■□□ 2.06
SSBP4-206ENST00000599699 ETS1P14921 441 aa27.9■■■□□ 2.06
SSBP4-206ENST00000599699 ZNF8P17098 575 aaPredicted RBP27.9■■■□□ 2.06
SSBP4-206ENST00000599699 FDFT1P37268 417 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms