RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 PLD2O14939 933 aa14.95□□□□□ -0.02
LIG1-215ENST00000597901 PPM1DO15297 605 aa14.95□□□□□ -0.02
LIG1-215ENST00000597901 MTSS1O43312 755 aa14.95□□□□□ -0.02
LIG1-215ENST00000597901 DNAJC6O75061 913 aa14.95□□□□□ -0.02
LIG1-215ENST00000597901 NDST3O95803 873 aa14.95□□□□□ -0.02
LIG1-215ENST00000597901 CCKBRP32239 447 aa14.95□□□□□ -0.02
LIG1-215ENST00000597901 UGT1A5P35504 534 aa14.95□□□□□ -0.02
LIG1-215ENST00000597901 MLLT3P42568 568 aaPredicted RBP14.95□□□□□ -0.02
LIG1-215ENST00000597901 EIF3IQ13347 325 aaKnown RBP14.95□□□□□ -0.02
LIG1-215ENST00000597901 SOWAHCQ53LP3 525 aaPredicted RBP14.95□□□□□ -0.02
LIG1-215ENST00000597901 PID1Q7Z2X4 250 aa14.95□□□□□ -0.02
LIG1-215ENST00000597901 ZNF438Q7Z4V0 828 aa14.95□□□□□ -0.02
LIG1-215ENST00000597901 CCDC50Q8IVM0 306 aa14.95□□□□□ -0.02
LIG1-215ENST00000597901 GPR26Q8NDV2 337 aa14.95□□□□□ -0.02
LIG1-215ENST00000597901 RBM41Q96IZ5 413 aaKnown RBP14.95□□□□□ -0.02
LIG1-215ENST00000597901 CALR3Q96L12 384 aaKnown RBP14.95□□□□□ -0.02
LIG1-215ENST00000597901 GPR63Q9BZJ6 419 aa14.95□□□□□ -0.02
LIG1-215ENST00000597901 VPS18Q9P253 973 aa14.95□□□□□ -0.02
LIG1-215ENST00000597901 FAM153AQ9UHL3 310 aa14.95□□□□□ -0.02
LIG1-215ENST00000597901 REXO2Q9Y3B8 237 aaKnown RBP14.95□□□□□ -0.02
LIG1-215ENST00000597901 PCDHA3Q9Y5H8 950 aa14.95□□□□□ -0.02
LIG1-215ENST00000597901 PCYT1BQ9Y5K3 369 aaPredicted RBP14.95□□□□□ -0.02
LIG1-215ENST00000597901 DSPP15924 2871 aaKnown RBP14.95□□□□□ -0.02
LIG1-215ENST00000597901 CACNA1GO43497 2377 aa14.95□□□□□ -0.02
LIG1-215ENST00000597901 LOC285095A0A1B0GVY8 99 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 ZW10O43264 779 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 EPOP01588 193 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 NFKB1P19838 968 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 CD1CP29017 333 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 GPR3P46089 330 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 NAP1L1P55209 391 aaKnown RBP14.94□□□□□ -0.02
LIG1-215ENST00000597901 BIRC2Q13490 618 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 LRP8Q14114 963 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 NR1D2Q14995 579 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 PPP2R5EQ16537 467 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 AMZ1Q400G9 498 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 KDELC1Q6UW63 502 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 RAD9BQ6WBX8 426 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 CHST15Q7LFX5 561 aaPredicted RBP14.94□□□□□ -0.02
LIG1-215ENST00000597901 TMPRSS9Q7Z410 1059 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 PIM3Q86V86 326 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 KCNE4Q8WWG9 221 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 HTR3CQ8WXA8 447 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 HAUS1Q96CS2 278 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 UBL7Q96S82 380 aaPredicted RBP14.94□□□□□ -0.02
LIG1-215ENST00000597901 SRPK1Q96SB4 655 aaKnown RBP14.94□□□□□ -0.02
LIG1-215ENST00000597901 SPATA16Q9BXB7 569 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 DPH1Q9BZG8 443 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 RMI1Q9H9A7 625 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 TRIM39Q9HCM9 518 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 RAD18Q9NS91 495 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 ZNF711Q9Y462 761 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 SPO11Q9Y5K1 396 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 LAMA5O15230 3695 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 SHROOM3Q8TF72 1996 aa14.94□□□□□ -0.02
LIG1-215ENST00000597901 HACD1B0YJ81 288 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 AURKAO14965 403 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 KLK10O43240 276 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 SLC25A14O95258 325 aaPredicted RBP14.93□□□□□ -0.02
LIG1-215ENST00000597901 IPO7O95373 1038 aaKnown RBP14.93□□□□□ -0.02
LIG1-215ENST00000597901 CPNE6O95741 557 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 EML2O95834 649 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 HGFP14210 728 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 WNT3AP56704 352 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 COPS2P61201 443 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 XRCC4Q13426 336 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 SQSTM1Q13501 440 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 ZNF648Q5T619 568 aaPredicted RBP14.93□□□□□ -0.02
LIG1-215ENST00000597901 BROXQ5VW32 411 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 ALS2CLQ60I27 953 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 ZNF574Q6ZN55 896 aaPredicted RBP14.93□□□□□ -0.02
LIG1-215ENST00000597901 BBS12Q6ZW61 710 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 CLEC14AQ86T13 490 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 SLITRK4Q8IW52 837 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 ZNF567Q8N184 647 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 TRAM1L1Q8N609 369 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 FCRL5Q96RD9 977 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 VAT1Q99536 393 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 LACRTQ9GZZ8 138 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 CARD9Q9H257 536 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 SEMA6CQ9H3T2 930 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 RDH14Q9HBH5 336 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 ARFGAP3Q9NP61 516 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 KLHL8Q9P2G9 620 aaPredicted RBP14.93□□□□□ -0.02
LIG1-215ENST00000597901 ATXN10Q9UBB4 475 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 TRHDEQ9UKU6 1024 aa14.93□□□□□ -0.02
LIG1-215ENST00000597901 RP1P56715 2156 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 CELSR3Q9NYQ7 3312 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 BTNL10A8MVZ5 291 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 AGRPO00253 132 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 PJA2O43164 708 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 GRID2O43424 1007 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 NUAK1O60285 661 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 ITGA2BP08514 1039 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 ZNF8P17098 575 aaPredicted RBP14.92□□□□□ -0.02
LIG1-215ENST00000597901 BPIP17213 487 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 CTNNA1P35221 906 aaKnown RBP14.92□□□□□ -0.02
LIG1-215ENST00000597901 DCDC1P59894 354 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 CLPPQ16740 277 aaPredicted RBP14.92□□□□□ -0.02
LIG1-215ENST00000597901 SIRPB2Q5JXA9 342 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms