RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 RBM44Q6ZP01 1051 aaKnown RBP12.95□□□□□ -0.34
USE1-207ENST00000596136 ZNF662Q6ZS27 426 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 ZNF438Q7Z4V0 828 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 TRIM74Q86UV6 250 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 CDKL3Q8IVW4 592 aaPredicted RBP12.95□□□□□ -0.34
USE1-207ENST00000596136 SFTPA2Q8IWL1 248 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 KLHDC8BQ8IXV7 354 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 TTC30BQ8N4P2 665 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 TRAM1L1Q8N609 369 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 CCDC74AQ96AQ1 378 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 PLEKHG4BQ96PX9 1271 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 OR2M4Q96R27 311 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 FERMT1Q9BQL6 677 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 GORASP1Q9BQQ3 440 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 GPR63Q9BZJ6 419 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 GBA3Q9H227 469 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 DPEP2Q9H4A9 486 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 C10orf88Q9H8K7 445 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 RMI1Q9H9A7 625 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 HACD3Q9P035 362 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 TAAR2Q9P1P5 351 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 ENTPD2Q9Y5L3 495 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 CAPN6Q9Y6Q1 641 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 FAM208BQ5VWN6 2430 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 ITPR1Q14643 2758 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 A0A087WV48 116 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 A0A1W2PQM1 296 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 GPR89AB7ZAQ6 455 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 AURKAO14965 403 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 CASC3O15234 703 aaKnown RBP12.94□□□□□ -0.34
USE1-207ENST00000596136 ARHGAP6O43182 974 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 ANXA9O76027 345 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 FTCDO95954 541 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 GPR89BP0CG08 455 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 ADRA1AP35348 466 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 LSSP48449 732 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 PDX1P52945 283 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 ANKRD20A2Q5SQ80 823 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 CCDC181Q5TID7 509 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 ANKRD20A1Q5TYW2 823 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 ANKRD20A3Q5VUR7 823 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 ITPRIPL1Q6GPH6 555 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 DOK6Q6PKX4 331 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 RANBP10Q6VN20 620 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 TTC13Q8NBP0 860 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 CCDC112Q8NEF3 446 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 ZDHHC1Q8WTX9 485 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 TSGA10Q9BZW7 698 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 CARD9Q9H257 536 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 TRIM39Q9HCM9 518 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 IL17CQ9P0M4 197 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 LRIT1Q9P2V4 623 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 RSPH14Q9UHP6 348 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 PACSIN2Q9UNF0 486 aaPredicted RBP12.94□□□□□ -0.34
USE1-207ENST00000596136 RAXQ9Y2V3 346 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 PLEKHM1Q9Y4G2 1056 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 GPSM3Q9Y4H4 160 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 PCYT1BQ9Y5K3 369 aaPredicted RBP12.94□□□□□ -0.34
USE1-207ENST00000596136 RNF215Q9Y6U7 377 aa12.94□□□□□ -0.34
USE1-207ENST00000596136 ZFYVE26Q68DK2 2539 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 A0A1W2PNU3 283 aaPredicted RBP12.93□□□□□ -0.34
USE1-207ENST00000596136 C5orf60A6NFR6 353 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 B4DGG1 531 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 CHUKO15111 745 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 KRT86O43790 486 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 NUAK1O60285 661 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 USP12O75317 370 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 ASMTLO95671 621 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 ATP1A1P05023 1023 aaKnown RBP12.93□□□□□ -0.34
USE1-207ENST00000596136 CHRNA4P43681 627 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 GEMP55040 296 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 CCL7P80098 99 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 B4GALNT1Q00973 533 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 MSLNQ13421 630 aaPredicted RBP12.93□□□□□ -0.34
USE1-207ENST00000596136 SPIDRQ14159 915 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 ZDHHC20Q5W0Z9 365 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 DARS2Q6PI48 645 aaKnown RBP12.93□□□□□ -0.34
USE1-207ENST00000596136 SPRED1Q7Z699 444 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 GALNT13Q8IUC8 556 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 LSMEM2Q8N112 164 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 NAGSQ8N159 534 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 ARL14Q8N4G2 192 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 IPMKQ8NFU5 416 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 SNIP1Q8TAD8 396 aaKnown RBP12.93□□□□□ -0.34
USE1-207ENST00000596136 GLYATL1Q969I3 302 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 PRR11Q96HE9 360 aaPredicted RBP12.93□□□□□ -0.34
USE1-207ENST00000596136 SPATA13Q96N96 652 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 VPS35Q96QK1 796 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 GFM1Q96RP9 751 aaKnown RBP12.93□□□□□ -0.34
USE1-207ENST00000596136 SPATA16Q9BXB7 569 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 LRRN3Q9H3W5 708 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 POLR1BQ9H9Y6 1135 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.93□□□□□ -0.34
USE1-207ENST00000596136 ATXN10Q9UBB4 475 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 AAR2Q9Y312 384 aaKnown RBP12.93□□□□□ -0.34
USE1-207ENST00000596136 AK5Q9Y6K8 562 aa12.93□□□□□ -0.34
USE1-207ENST00000596136 NBEAQ8NFP9 2946 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 BPTFQ12830 3046 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 GOLGA6L9A6NEM1 432 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 D6RAR5 112 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms