RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 LMTK2Q8IWU2 1503 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 LINC01553A4QN01 128 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 B4E171 279 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 F5H0A9 414 aaPredicted RBP4.99□□□□□ -1.61
SMAD4-216ENST00000593223 IKBKBO14920 756 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 TIMM23O14925 209 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 NDUFB4O95168 129 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 VNN2O95498 520 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 MT-CYBP00156 380 aaPredicted RBP4.99□□□□□ -1.61
SMAD4-216ENST00000593223 ETFAP13804 333 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 ATP6V1B1P15313 513 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 ABCD1P33897 745 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 PIGAP37287 484 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 MXI1P50539 228 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 EFNA5P52803 228 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 HMGN5P82970 282 aaKnown RBP4.99□□□□□ -1.61
SMAD4-216ENST00000593223 NEDD9Q14511 834 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 C8orf82Q6P1X6 216 aaPredicted RBP4.99□□□□□ -1.61
SMAD4-216ENST00000593223 OTUD6AQ7L8S5 288 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 SHFQ7M4L6 423 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 SPATA2LQ8IUW3 424 aaPredicted RBP4.99□□□□□ -1.61
SMAD4-216ENST00000593223 CEP57L1Q8IYX8 460 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 FBXL8Q96CD0 374 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 MED30Q96HR3 178 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 SLC25A33Q9BSK2 321 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 AGXT2Q9BYV1 514 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 PDCL3Q9H2J4 239 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 MRGBPQ9NV56 204 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 COMMD8Q9NX08 183 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 CISD1Q9NZ45 108 aaKnown RBP4.99□□□□□ -1.61
SMAD4-216ENST00000593223 A4GNTQ9UNA3 340 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 LRPPRCP42704 1394 aaKnown RBP4.99□□□□□ -1.61
SMAD4-216ENST00000593223 SZT2Q5T011 3432 aa4.99□□□□□ -1.61
SMAD4-216ENST00000593223 PHRF1Q9P1Y6 1649 aaKnown RBP4.98□□□□□ -1.61
SMAD4-216ENST00000593223 COL24A1Q17RW2 1714 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 A0A0U1RQF3 1178 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 PAPSS2O95340 614 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-216ENST00000593223 CH25HO95992 272 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 TFP02787 698 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 ATP1A3P13637 1013 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 CD58P19256 250 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 ATP6V1E1P36543 226 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 HARS2P49590 506 aaKnown RBP4.98□□□□□ -1.61
SMAD4-216ENST00000593223 GNAQP50148 359 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 CASP6P55212 293 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 ZXDBP98169 803 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 PTP4A2Q12974 167 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 GRIK3Q13003 919 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 ERV3-1Q14264 604 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 RNPS1Q15287 305 aaKnown RBP4.98□□□□□ -1.61
SMAD4-216ENST00000593223 E2F5Q15329 346 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 TCTN1Q2MV58 587 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 PRICKLE4Q2TBC4 344 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 ZNF585BQ52M93 769 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 EFHC1Q5JVL4 640 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 MFSD4BQ5TF39 518 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 KIAA1161Q6NSJ0 714 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 ATF7IPQ6VMQ6 1270 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 H1FNTQ75WM6 255 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-216ENST00000593223 SLC46A3Q7Z3Q1 461 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 NOXA1Q86UR1 476 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 DHX40Q8IX18 779 aaKnown RBP4.98□□□□□ -1.61
SMAD4-216ENST00000593223 AADATQ8N5Z0 425 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 PCYOX1LQ8NBM8 494 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 FAM216AQ8WUB2 273 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 TMED6Q8WW62 240 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 ERGIC1Q969X5 290 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 LRFN5Q96NI6 719 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 BARD1Q99728 777 aaKnown RBP4.98□□□□□ -1.61
SMAD4-216ENST00000593223 BAG1Q99933 345 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-216ENST00000593223 ADPGKQ9BRR6 497 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 MMTAG2Q9BU76 263 aaKnown RBP4.98□□□□□ -1.61
SMAD4-216ENST00000593223 TM6SF1Q9BZW5 370 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 RANBP17Q9H2T7 1088 aaKnown RBP4.98□□□□□ -1.61
SMAD4-216ENST00000593223 IRAK4Q9NWZ3 460 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 CPSF2Q9P2I0 782 aaKnown RBP4.98□□□□□ -1.61
SMAD4-216ENST00000593223 GIMAP2Q9UG22 337 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 AGO1Q9UL18 857 aaKnown RBP4.98□□□□□ -1.61
SMAD4-216ENST00000593223 NAALADL1Q9UQQ1 740 aa4.98□□□□□ -1.61
SMAD4-216ENST00000593223 RRBP1Q9P2E9 1410 aaKnown RBP4.97□□□□□ -1.61
SMAD4-216ENST00000593223 CACNA1AO00555 2505 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 TSPY2A6NKD2 308 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 LRRC53A6NM62 1247 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 TMEM110-MUSTN1A8MSY1 372 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 B4DLN1 442 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 SNAP23O00161 211 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 PES1O00541 588 aaKnown RBP4.97□□□□□ -1.61
SMAD4-216ENST00000593223 KLK8O60259 260 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 TSPY3P0CV98 308 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 TSPY8P0CW00 308 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 DESP17661 470 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 MUTP22033 750 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 ITGB8P26012 769 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 CHATP28329 748 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 EIF3BP55884 814 aaKnown RBP4.97□□□□□ -1.61
SMAD4-216ENST00000593223 IRX3P78415 501 aaPredicted RBP4.97□□□□□ -1.61
SMAD4-216ENST00000593223 TMF1P82094 1093 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 TSPY1Q01534 308 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 IFT88Q13099 833 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 PPP2R5CQ13362 524 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms