RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 PIM3Q86V86 326 aa12.99□□□□□ -0.33
PRKCSH-218ENST00000593053 SLITRK4Q8IW52 837 aa12.99□□□□□ -0.33
PRKCSH-218ENST00000593053 CCDC170Q8IYT3 715 aa12.99□□□□□ -0.33
PRKCSH-218ENST00000593053 TADA1Q96BN2 335 aa12.99□□□□□ -0.33
PRKCSH-218ENST00000593053 EID2BQ96D98 161 aa12.99□□□□□ -0.33
PRKCSH-218ENST00000593053 CCDC97Q96F63 343 aaPredicted RBP12.99□□□□□ -0.33
PRKCSH-218ENST00000593053 SEMA6CQ9H3T2 930 aa12.99□□□□□ -0.33
PRKCSH-218ENST00000593053 ZFYVE1Q9HBF4 777 aa12.99□□□□□ -0.33
PRKCSH-218ENST00000593053 VPS18Q9P253 973 aa12.99□□□□□ -0.33
PRKCSH-218ENST00000593053 PISDQ9UG56 409 aa12.99□□□□□ -0.33
PRKCSH-218ENST00000593053 PCDHGA7Q9Y5G6 932 aa12.99□□□□□ -0.33
PRKCSH-218ENST00000593053 PCDHA13Q9Y5I0 950 aa12.99□□□□□ -0.33
PRKCSH-218ENST00000593053 PCYT1BQ9Y5K3 369 aaPredicted RBP12.99□□□□□ -0.33
PRKCSH-218ENST00000593053 ATRXP46100 2492 aa12.99□□□□□ -0.33
PRKCSH-218ENST00000593053 TRBV23OR9-2A0A075B6M9 112 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 A0A0A6YYK5 440 aaPredicted RBP12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 PPM1DO15297 605 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 ZW10O43264 779 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 DNAJC6O75061 913 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 PMPCBO75439 489 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 LCA5LO95447 670 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 CPNE6O95741 557 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 MT-CYBP00156 380 aaPredicted RBP12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 ITIH1P19827 911 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 PTPN3P26045 913 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 CD1CP29017 333 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 SLC5A2P31639 672 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 MARCKSL1P49006 195 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 ADCY2Q08462 1091 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 NR1D2Q14995 579 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 TEX44Q53QW1 395 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 ARHGAP40Q5TG30 622 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 CHST15Q7LFX5 561 aaPredicted RBP12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 KATNAL2Q8IYT4 538 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 TFB1MQ8WVM0 346 aaKnown RBP12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 HAUS1Q96CS2 278 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 TEKT5Q96M29 485 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 CMKLR1Q99788 373 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 NUDT22Q9BRQ3 303 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 GPR63Q9BZJ6 419 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 MAGEE1Q9HCI5 957 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 ARFGAP3Q9NP61 516 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 WDR70Q9NW82 654 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 UBP1Q9NZI7 540 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 ZNF711Q9Y462 761 aa12.98□□□□□ -0.33
PRKCSH-218ENST00000593053 SMG1Q96Q15 3661 aaKnown RBP12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 TEX51A0A1B0GUA7 166 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 ZRANB2O95218 330 aaKnown RBP eCLIP12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 NDST3O95803 873 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 EML2O95834 649 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 ACP5P13686 325 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 CYLC1P35663 651 aaPredicted RBP12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 ETV5P41161 510 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 GPR3P46089 330 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 ZNF75DP51815 510 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 WASHC5Q12768 1159 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 CLN3Q13286 438 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 SLC14A2Q15849 920 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 TFDP3Q5H9I0 405 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 ZNF569Q5MCW4 686 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 NKAIN2Q5VXU1 208 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 CCDC70Q6NSX1 233 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 C11orf63Q6NUN7 778 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 TMC3Q7Z5M5 1100 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 ZC3H18Q86VM9 953 aaKnown RBP12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 CCDC50Q8IVM0 306 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 RCOR2Q8IZ40 523 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 GPR26Q8NDV2 337 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 SLC37A2Q8TED4 501 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 KRT35Q92764 455 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 P3H4Q92791 437 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 TMEM159Q96B96 161 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 SPATA16Q9BXB7 569 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 LUC7LQ9NQ29 371 aaKnown RBP12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 KCNK6Q9Y257 313 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 SPO11Q9Y5K1 396 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 PTPRQQ9UMZ3 2332 aa12.97□□□□□ -0.33
PRKCSH-218ENST00000593053 hCG_1818297A0A087WSY0 165 aa12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 F5H423 210 aaPredicted RBP12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 ATXN7O15265 892 aaPredicted RBP12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 GRID2O43424 1007 aa12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 SLC25A14O95258 325 aaPredicted RBP12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 BPIP17213 487 aa12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 NFKB1P19838 968 aa12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 CD68P34810 354 aaPredicted RBP12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 MAPK10P53779 464 aa12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 DCDC1P59894 354 aa12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 VAC14Q08AM6 782 aa12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 C16orf72Q14CZ0 275 aa12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 CLPPQ16740 277 aaPredicted RBP12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 ZNF648Q5T619 568 aaPredicted RBP12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 ZNF574Q6ZN55 896 aaPredicted RBP12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 DAAM2Q86T65 1068 aa12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 ZNF761Q86XN6 746 aaPredicted RBP12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 SFRP1Q8N474 314 aa12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 RCBTB1Q8NDN9 531 aa12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 SLC39A7Q92504 469 aa12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 RBM41Q96IZ5 413 aaKnown RBP12.96□□□□□ -0.33
PRKCSH-218ENST00000593053 CCDC74BQ96LY2 380 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms