RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ZFYVE26Q68DK2 2539 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 IGF2-ASQ6U949 168 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 KDELC1Q6UW63 502 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 TMC3Q7Z5M5 1100 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 ZNF567Q8N184 647 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 ARL14Q8N4G2 192 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 GPR26Q8NDV2 337 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 WDR36Q8NI36 951 aaKnown RBP13.77□□□□□ -0.21
APOC1-208ENST00000592535 HTR3CQ8WXA8 447 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 LIN37Q96GY3 246 aaPredicted RBP13.77□□□□□ -0.21
APOC1-208ENST00000592535 NAF1Q96HR8 494 aaKnown RBP13.77□□□□□ -0.21
APOC1-208ENST00000592535 SLC46A1Q96NT5 459 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 GPR63Q9BZJ6 419 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 C10orf88Q9H8K7 445 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 VPS18Q9P253 973 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 KLHL8Q9P2G9 620 aaPredicted RBP13.77□□□□□ -0.21
APOC1-208ENST00000592535 PRKAB1Q9Y478 270 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 PCDHGA8Q9Y5G5 932 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 PCDHA3Q9Y5H8 950 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 SPO11Q9Y5K1 396 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 BTNL10A8MVZ5 291 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 HACD1B0YJ81 288 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 APOC4-APOC2K7ER74 178 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 AURKAO14965 403 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 PJA2O43164 708 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 B4GAT1O43505 415 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 APOC2P02655 101 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 CTNNA2P26232 953 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 CCKBRP32239 447 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 VAV2P52735 878 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 OR1D5P58170 312 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 DCDC1P59894 354 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 NOMO1Q15155 1222 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 CCDC70Q6NSX1 233 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 PID1Q7Z2X4 250 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 TMPRSS9Q7Z410 1059 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 ZNF438Q7Z4V0 828 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 TMEM139Q8IV31 216 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 SPACA3Q8IXA5 215 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 ZNF248Q8NDW4 579 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 OXNAD1Q96HP4 312 aaPredicted RBP13.76□□□□□ -0.21
APOC1-208ENST00000592535 CALR3Q96L12 384 aaKnown RBP13.76□□□□□ -0.21
APOC1-208ENST00000592535 TMEM74Q96NL1 305 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 BAG1Q99933 345 aaPredicted RBP13.76□□□□□ -0.21
APOC1-208ENST00000592535 SPATA16Q9BXB7 569 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 ARFGAP3Q9NP61 516 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 THSD1Q9NS62 852 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 FAM153AQ9UHL3 310 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 ZNHIT2Q9UHR6 403 aa13.76□□□□□ -0.21
APOC1-208ENST00000592535 PTPRQQ9UMZ3 2332 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 LOC285095A0A1B0GVY8 99 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 GRID2IPA4D2P6 1211 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 RHPN2P1A8MT19 583 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 CDRT15L2A8MXV6 281 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 H7C0C1 242 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 PPM1DO15297 605 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 TNFSF15O95150 251 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 EML2O95834 649 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 HGFP14210 728 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 BPIP17213 487 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 RBL1P28749 1068 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 ALDH4A1P30038 563 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 CHRNA4P43681 627 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 ATP5OP48047 213 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 WNT3AP56704 352 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 COPS2P61201 443 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 XRCC4Q13426 336 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 PEX6Q13608 980 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 LRP8Q14114 963 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 NR1D2Q14995 579 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 AMZ1Q400G9 498 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 ZNF569Q5MCW4 686 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 ZNF648Q5T619 568 aaPredicted RBP13.75□□□□□ -0.21
APOC1-208ENST00000592535 CCDC181Q5TID7 509 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 AADACL2Q6P093 401 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 RAB11FIP2Q7L804 512 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 CHST15Q7LFX5 561 aaPredicted RBP13.75□□□□□ -0.21
APOC1-208ENST00000592535 KIAA1328Q86T90 577 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 FBXO39Q8N4B4 442 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 TRAM1L1Q8N609 369 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 LRRC57Q8N9N7 239 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 MRGPRX2Q96LB1 330 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 FCRL5Q96RD9 977 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 VAT1Q99536 393 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 OSBPL8Q9BZF1 889 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 STRADBQ9C0K7 418 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 RDH14Q9HBH5 336 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 RAD18Q9NS91 495 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 ATXN10Q9UBB4 475 aa13.75□□□□□ -0.21
APOC1-208ENST00000592535 NFKBIL1Q9UBC1 381 aaPredicted RBP13.75□□□□□ -0.21
APOC1-208ENST00000592535 CACNA1GO43497 2377 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 TRBV23OR9-2A0A075B6M9 112 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 A0A0U1RQJ8 604 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 MACROD2A1Z1Q3 448 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 CCDC66A2RUB6 948 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 TMX2-CTNND1H3BSU7 103 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 AGRPO00253 132 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 PLD2O14939 933 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 NUAK1O60285 661 aa13.74□□□□□ -0.21
APOC1-208ENST00000592535 ACP5P13686 325 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms