RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 ENO2P09104 434 aaPredicted RBP12.32□□□□□ -0.44
PDE4A-207ENST00000590407 NELFEP18615 380 aaKnown RBP12.32□□□□□ -0.44
PDE4A-207ENST00000590407 HMOX2P30519 316 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 OXTRP30559 389 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 RPS9P46781 194 aaKnown RBP12.32□□□□□ -0.44
PDE4A-207ENST00000590407 ZFP36L2P47974 494 aaKnown RBP12.32□□□□□ -0.44
PDE4A-207ENST00000590407 PGFP49763 221 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 HLCSP50747 726 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 GALK1P51570 392 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 FOXA1P55317 472 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 KCNK10P57789 538 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 ADARB1P78563 741 aaKnown RBP12.32□□□□□ -0.44
PDE4A-207ENST00000590407 TUSC3Q13454 348 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 CBX2Q14781 532 aaPredicted RBP12.32□□□□□ -0.44
PDE4A-207ENST00000590407 PFKFB4Q16877 469 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 CYBRD1Q53TN4 286 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 MS4A13Q5J8X5 152 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 DDIASQ8IXT1 998 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 PGBD5Q8N414 524 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 CHCHD4Q8N4Q1 142 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 DPP10Q8N608 796 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 ATP6V0D2Q8N8Y2 350 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 FAM110BQ8TC76 370 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 TMEM209Q96SK2 561 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 ALG2Q9H553 416 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 CXorf21Q9HAI6 301 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 CATSPERZQ9NTU4 200 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 FAIMQ9NVQ4 179 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.32□□□□□ -0.44
PDE4A-207ENST00000590407 PCDHB8Q9UN66 801 aa12.32□□□□□ -0.44
PDE4A-207ENST00000590407 ASPDHA6ND91 283 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 H3BMM5 538 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 PRSS23O95084 383 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 SIX3O95343 332 aaPredicted RBP12.31□□□□□ -0.44
PDE4A-207ENST00000590407 MOCS2O96007 188 aaPredicted RBP12.31□□□□□ -0.44
PDE4A-207ENST00000590407 UROSP10746 265 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 GRIK1P39086 918 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 BRCC3P46736 316 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 MAPKAPK2P49137 400 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 TBX4P57082 545 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 MAXP61244 160 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 CTBSQ01459 385 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 EMX2Q04743 252 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 LIPEQ05469 1076 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 ITKQ08881 620 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 MGAT3Q09327 533 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 MTA1Q13330 715 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 SERINC3Q13530 473 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 NFYCQ13952 458 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 DSC3Q14574 896 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 CRY1Q16526 586 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 CYP51A1Q16850 503 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 CCNYL2Q5T2Q4 361 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 LDB1Q86U70 411 aaPredicted RBP12.31□□□□□ -0.44
PDE4A-207ENST00000590407 FBXO39Q8N4B4 442 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 TMEM199Q8N511 208 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 OR4L1Q8NH43 312 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 BPIFB1Q8TDL5 484 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 SH3RF2Q8TEC5 729 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 FUBP3Q96I24 572 aaKnown RBP eCLIP12.31□□□□□ -0.44
PDE4A-207ENST00000590407 BTN2A3PQ96KV6 586 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 C8orf48Q96LL4 319 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 KCTD14Q9BQ13 255 aaPredicted RBP12.31□□□□□ -0.44
PDE4A-207ENST00000590407 POLR1EQ9GZS1 481 aaKnown RBP12.31□□□□□ -0.44
PDE4A-207ENST00000590407 MUC3BQ9H195 1237 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 FBXO44Q9H4M3 255 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 RETREG1Q9H6L5 497 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 RPF2Q9H7B2 306 aaKnown RBP12.31□□□□□ -0.44
PDE4A-207ENST00000590407 IL37Q9NZH6 218 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 PKD2L2Q9NZM6 624 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 RNF181Q9P0P0 153 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 EBF1Q9UH73 591 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 EGFL7Q9UHF1 273 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 FAF1Q9UNN5 650 aaPredicted RBP12.31□□□□□ -0.44
PDE4A-207ENST00000590407 CRYL1Q9Y2S2 319 aa12.31□□□□□ -0.44
PDE4A-207ENST00000590407 FAM234BA2RU67 622 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 OR51F1A6NGY5 319 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 IFRD1O00458 451 aaPredicted RBP12.3□□□□□ -0.44
PDE4A-207ENST00000590407 PPP6CO00743 305 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 EI24O14681 340 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 TULP3O75386 442 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 ESRRBO95718 433 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 CHEK2O96017 543 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 IMPDH2P12268 514 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 VARSP26640 1264 aaKnown RBP12.3□□□□□ -0.44
PDE4A-207ENST00000590407 EEF1DP29692 281 aaKnown RBP12.3□□□□□ -0.44
PDE4A-207ENST00000590407 ERVK-8P63133 956 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 CAPRIN1Q14444 709 aaKnown RBP12.3□□□□□ -0.44
PDE4A-207ENST00000590407 TRIP4Q15650 581 aaPredicted RBP12.3□□□□□ -0.44
PDE4A-207ENST00000590407 GEN1Q17RS7 908 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 ZNF554Q86TJ5 538 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 NKAPQ8N5F7 415 aaKnown RBP12.3□□□□□ -0.44
PDE4A-207ENST00000590407 SMYD1Q8NB12 490 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 BORCS5Q969J3 196 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 PSMG2Q969U7 264 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 ISG20Q96AZ6 181 aaKnown RBP12.3□□□□□ -0.44
PDE4A-207ENST00000590407 PABPC5Q96DU9 382 aaKnown RBP12.3□□□□□ -0.44
PDE4A-207ENST00000590407 RDH12Q96NR8 316 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 NSUN5Q96P11 429 aaKnown RBP12.3□□□□□ -0.44
PDE4A-207ENST00000590407 KLHL5Q96PQ7 755 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms