RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 FFAR2O15552 330 aa21.14■□□□□ 0.97
ATG4D-212ENST00000590096 LDB2O43679 373 aa21.14■□□□□ 0.97
ATG4D-212ENST00000590096 SLC25A14O95258 325 aaPredicted RBP21.14■□□□□ 0.97
ATG4D-212ENST00000590096 KCNK5O95279 499 aa21.14■□□□□ 0.97
ATG4D-212ENST00000590096 CEACAM5P06731 702 aa21.14■□□□□ 0.97
ATG4D-212ENST00000590096 CEACAM1P13688 526 aa21.14■□□□□ 0.97
ATG4D-212ENST00000590096 GRIA1P42261 906 aa21.14■□□□□ 0.97
ATG4D-212ENST00000590096 ZNF140P52738 457 aaPredicted RBP21.14■□□□□ 0.97
ATG4D-212ENST00000590096 SARNPP82979 210 aaKnown RBP21.14■□□□□ 0.97
ATG4D-212ENST00000590096 LAMB3Q13751 1172 aa21.14■□□□□ 0.97
ATG4D-212ENST00000590096 ITGA9Q13797 1035 aa21.14■□□□□ 0.97
ATG4D-212ENST00000590096 PTPRCAPQ14761 206 aa21.14■□□□□ 0.97
ATG4D-212ENST00000590096 ELOCQ15369 112 aa21.14■□□□□ 0.97
ATG4D-212ENST00000590096 PHYKPLQ8IUZ5 450 aa21.14■□□□□ 0.97
ATG4D-212ENST00000590096 FSTL5Q8N475 847 aaPredicted RBP21.14■□□□□ 0.97
ATG4D-212ENST00000590096 DTX3LQ8TDB6 740 aa21.14■□□□□ 0.97
ATG4D-212ENST00000590096 GLYATL1Q969I3 302 aa21.14■□□□□ 0.97
ATG4D-212ENST00000590096 CDC6Q99741 560 aa21.14■□□□□ 0.97
ATG4D-212ENST00000590096 C19orf43Q9BQ61 176 aa21.14■□□□□ 0.97
ATG4D-212ENST00000590096 SUDS3Q9H7L9 328 aaPredicted RBP21.14■□□□□ 0.97
ATG4D-212ENST00000590096 APPL1Q9UKG1 709 aa21.14■□□□□ 0.97
ATG4D-212ENST00000590096 SLC17A4Q9Y2C5 497 aa21.14■□□□□ 0.97
ATG4D-212ENST00000590096 TMEM98Q9Y2Y6 226 aa21.14■□□□□ 0.97
ATG4D-212ENST00000590096 NEU2Q9Y3R4 380 aa21.14■□□□□ 0.97
ATG4D-212ENST00000590096 CSNK1G3Q9Y6M4 447 aa21.14■□□□□ 0.97
ATG4D-212ENST00000590096 HEATR9A2RTY3 570 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 KIF2AO00139 706 aaPredicted RBP21.13■□□□□ 0.97
ATG4D-212ENST00000590096 SCAMP1O15126 338 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 TUBB4AP04350 444 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 POLD2P49005 469 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 TMPRSS15P98073 1019 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 C1orf61Q13536 156 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 CHRNA6Q15825 494 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 ATP13A5Q4VNC0 1218 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 CERCAMQ5T4B2 595 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 PSAPL1Q6NUJ1 521 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 DGLUCYQ7Z3D6 616 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 OR13C4Q8NGS5 318 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 GDAP1Q8TB36 358 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 SLCO2A1Q92959 643 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 VPS35Q96QK1 796 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 DUSP23Q9BVJ7 150 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 NLGN3Q9NZ94 848 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 VPS18Q9P253 973 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 FTSJ1Q9UET6 329 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 ASIC3Q9UHC3 531 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 FKBPLQ9UIM3 349 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 SUFUQ9UMX1 484 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 DOLKQ9UPQ8 538 aa21.13■□□□□ 0.97
ATG4D-212ENST00000590096 ZNF106Q9H2Y7 1883 aaKnown RBP21.12■□□□□ 0.97
ATG4D-212ENST00000590096 CBFA2T3O75081 653 aa21.12■□□□□ 0.97
ATG4D-212ENST00000590096 PRAMEF1O95521 474 aa21.12■□□□□ 0.97
ATG4D-212ENST00000590096 IVLP07476 585 aa21.12■□□□□ 0.97
ATG4D-212ENST00000590096 ANXA6P08133 673 aa21.12■□□□□ 0.97
ATG4D-212ENST00000590096 ADCY8P40145 1251 aa21.12■□□□□ 0.97
ATG4D-212ENST00000590096 GNPDA1P46926 289 aa21.12■□□□□ 0.97
ATG4D-212ENST00000590096 DR1Q01658 176 aa21.12■□□□□ 0.97
ATG4D-212ENST00000590096 KCNJ11Q14654 390 aa21.12■□□□□ 0.97
ATG4D-212ENST00000590096 KCTD16Q68DU8 428 aa21.12■□□□□ 0.97
ATG4D-212ENST00000590096 MARK2Q7KZI7 788 aaKnown RBP21.12■□□□□ 0.97
ATG4D-212ENST00000590096 GKN2Q86XP6 184 aa21.12■□□□□ 0.97
ATG4D-212ENST00000590096 OR4C6Q8NH72 309 aa21.12■□□□□ 0.97
ATG4D-212ENST00000590096 STYXQ8WUJ0 223 aa21.12■□□□□ 0.97
ATG4D-212ENST00000590096 ZNF592Q92610 1267 aa21.12■□□□□ 0.97
ATG4D-212ENST00000590096 DNAJC1Q96KC8 554 aaKnown RBP21.12■□□□□ 0.97
ATG4D-212ENST00000590096 NLE1Q9NVX2 485 aaPredicted RBP21.12■□□□□ 0.97
ATG4D-212ENST00000590096 OAS3Q9Y6K5 1087 aaKnown RBP21.12■□□□□ 0.97
ATG4D-212ENST00000590096 CNOT1A5YKK6 2376 aaKnown RBP21.11■□□□□ 0.97
ATG4D-212ENST00000590096 LDOC1O95751 146 aaPredicted RBP21.11■□□□□ 0.97
ATG4D-212ENST00000590096 MAGEA6P43360 314 aa21.11■□□□□ 0.97
ATG4D-212ENST00000590096 SESN2P58004 480 aaPredicted RBP21.11■□□□□ 0.97
ATG4D-212ENST00000590096 PTK6Q13882 451 aa21.11■□□□□ 0.97
ATG4D-212ENST00000590096 TCEA2Q15560 299 aa21.11■□□□□ 0.97
ATG4D-212ENST00000590096 TRIP6Q15654 476 aaKnown RBP21.11■□□□□ 0.97
ATG4D-212ENST00000590096 SKIDA1Q1XH10 827 aa21.11■□□□□ 0.97
ATG4D-212ENST00000590096 CCDC38Q502W7 563 aa21.11■□□□□ 0.97
ATG4D-212ENST00000590096 PPM1JQ5JR12 505 aa21.11■□□□□ 0.97
ATG4D-212ENST00000590096 LRRC8BQ6P9F7 803 aa21.11■□□□□ 0.97
ATG4D-212ENST00000590096 SYDE1Q6ZW31 735 aaPredicted RBP21.11■□□□□ 0.97
ATG4D-212ENST00000590096 GALNT13Q8IUC8 556 aa21.11■□□□□ 0.97
ATG4D-212ENST00000590096 SDR16C5Q8N3Y7 309 aa21.11■□□□□ 0.97
ATG4D-212ENST00000590096 PPHLN1Q8NEY8 458 aaKnown RBP21.11■□□□□ 0.97
ATG4D-212ENST00000590096 BAHD1Q8TBE0 780 aaPredicted RBP21.11■□□□□ 0.97
ATG4D-212ENST00000590096 ZNF398Q8TD17 642 aa21.11■□□□□ 0.97
ATG4D-212ENST00000590096 SCG3Q8WXD2 468 aaKnown RBP21.11■□□□□ 0.97
ATG4D-212ENST00000590096 CPT1BQ92523 772 aa21.11■□□□□ 0.97
ATG4D-212ENST00000590096 RANBP9Q96S59 729 aa21.11■□□□□ 0.97
ATG4D-212ENST00000590096 CLPBQ9H078 707 aa21.11■□□□□ 0.97
ATG4D-212ENST00000590096 TMEM168Q9H0V1 697 aa21.11■□□□□ 0.97
ATG4D-212ENST00000590096 TRIM39Q9HCM9 518 aa21.11■□□□□ 0.97
ATG4D-212ENST00000590096 ARFGAP3Q9NP61 516 aa21.11■□□□□ 0.97
ATG4D-212ENST00000590096 BFARQ9NZS9 450 aa21.11■□□□□ 0.97
ATG4D-212ENST00000590096 GPSM3Q9Y4H4 160 aa21.11■□□□□ 0.97
ATG4D-212ENST00000590096 COL5A1P20908 1838 aaPredicted RBP21.11■□□□□ 0.97
ATG4D-212ENST00000590096 PCNX2A6NKB5 2137 aa21.1■□□□□ 0.97
ATG4D-212ENST00000590096 TCRBV7S3A2A0A539 114 aa21.1■□□□□ 0.97
ATG4D-212ENST00000590096 MROH6A6NGR9 719 aa21.1■□□□□ 0.97
ATG4D-212ENST00000590096 LMO7DNF2Z398 122 aa21.1■□□□□ 0.97
ATG4D-212ENST00000590096 GAPDHSO14556 408 aaPredicted RBP21.1■□□□□ 0.97
ATG4D-212ENST00000590096 TPP1O14773 563 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms