RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 JPH3Q8WXH2 748 aaPredicted RBP14.23□□□□□ -0.13
VMP1-206ENST00000587945 PMEPA1Q969W9 287 aa14.23□□□□□ -0.13
VMP1-206ENST00000587945 EID2BQ96D98 161 aa14.23□□□□□ -0.13
VMP1-206ENST00000587945 FAM83DQ9H4H8 585 aa14.23□□□□□ -0.13
VMP1-206ENST00000587945 ARFGAP3Q9NP61 516 aa14.23□□□□□ -0.13
VMP1-206ENST00000587945 ABHD10Q9NUJ1 306 aa14.23□□□□□ -0.13
VMP1-206ENST00000587945 KCNK4Q9NYG8 393 aa14.23□□□□□ -0.13
VMP1-206ENST00000587945 SEPT10Q9P0V9 454 aa14.23□□□□□ -0.13
VMP1-206ENST00000587945 LCMT1Q9UIC8 334 aa14.23□□□□□ -0.13
VMP1-206ENST00000587945 HYOU1Q9Y4L1 999 aa14.23□□□□□ -0.13
VMP1-206ENST00000587945 ATMQ13315 3056 aa14.22□□□□□ -0.13
VMP1-206ENST00000587945 SHROOM3Q8TF72 1996 aa14.22□□□□□ -0.13
VMP1-206ENST00000587945 APOL1O14791 398 aa14.22□□□□□ -0.13
VMP1-206ENST00000587945 CBFA2T2O43439 604 aa14.22□□□□□ -0.13
VMP1-206ENST00000587945 KRT1P04264 644 aa14.22□□□□□ -0.13
VMP1-206ENST00000587945 FGF3P11487 239 aaPredicted RBP14.22□□□□□ -0.13
VMP1-206ENST00000587945 WT1P19544 449 aaPredicted RBP14.22□□□□□ -0.13
VMP1-206ENST00000587945 PPM1FP49593 454 aaPredicted RBP14.22□□□□□ -0.13
VMP1-206ENST00000587945 LIMK2P53671 638 aa14.22□□□□□ -0.13
VMP1-206ENST00000587945 DYNLT1P63172 113 aa14.22□□□□□ -0.13
VMP1-206ENST00000587945 PEX6Q13608 980 aa14.22□□□□□ -0.13
VMP1-206ENST00000587945 TRIM14Q14142 442 aa14.22□□□□□ -0.13
VMP1-206ENST00000587945 ZNF648Q5T619 568 aaPredicted RBP14.22□□□□□ -0.13
VMP1-206ENST00000587945 SLC9A4Q6AI14 798 aa14.22□□□□□ -0.13
VMP1-206ENST00000587945 LYSMD3Q7Z3D4 306 aa14.22□□□□□ -0.13
VMP1-206ENST00000587945 RFX6Q8HWS3 928 aa14.22□□□□□ -0.13
VMP1-206ENST00000587945 VSTM4Q8IW00 320 aa14.22□□□□□ -0.13
VMP1-206ENST00000587945 CCHCR1Q8TD31 782 aa14.22□□□□□ -0.13
VMP1-206ENST00000587945 RNF25Q96BH1 459 aaPredicted RBP14.22□□□□□ -0.13
VMP1-206ENST00000587945 AGAP3Q96P47 875 aa14.22□□□□□ -0.13
VMP1-206ENST00000587945 MAK16Q9BXY0 300 aaKnown RBP14.22□□□□□ -0.13
VMP1-206ENST00000587945 NHEJ1Q9H9Q4 299 aaPredicted RBP14.22□□□□□ -0.13
VMP1-206ENST00000587945 PKD2L2Q9NZM6 624 aa14.22□□□□□ -0.13
VMP1-206ENST00000587945 AKAP7Q9P0M2 348 aaPredicted RBP14.22□□□□□ -0.13
VMP1-206ENST00000587945 TBC1D29Q9UFV1 150 aa14.22□□□□□ -0.13
VMP1-206ENST00000587945 SHOC2Q9UQ13 582 aa14.22□□□□□ -0.13
VMP1-206ENST00000587945 KCNK6Q9Y257 313 aa14.22□□□□□ -0.13
VMP1-206ENST00000587945 AHCTF1Q8WYP5 2266 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 ZW10O43264 779 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 SNX2O60749 519 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 MFAP3LO75121 409 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 SLC4A1P02730 911 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 ACP5P13686 325 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 NOP2P46087 812 aaKnown RBP14.21□□□□□ -0.13
VMP1-206ENST00000587945 ARSDP51689 593 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 NFATC2Q13469 925 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 LRP8Q14114 963 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 LLGL1Q15334 1064 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 PCSK7Q16549 785 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 CLPPQ16740 277 aaPredicted RBP14.21□□□□□ -0.13
VMP1-206ENST00000587945 MANEAQ5SRI9 462 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 ALS2CLQ60I27 953 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 SFRP1Q8N474 314 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 RNF214Q8ND24 703 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 OR4D9Q8NGE8 314 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 CCDC42Q96M95 316 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 OLFM3Q96PB7 478 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 TRIB3Q96RU7 358 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 SLC38A3Q99624 504 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 ADGRE3Q9BY15 652 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 ZMYND15Q9H091 742 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 VPS18Q9P253 973 aa14.21□□□□□ -0.13
VMP1-206ENST00000587945 ZNF487B1APH4 448 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 HGSO14964 777 aaPredicted RBP14.2□□□□□ -0.14
VMP1-206ENST00000587945 MTA2O94776 668 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 TPM1P09493 284 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 THRAP10827 490 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 ZNF8P17098 575 aaPredicted RBP14.2□□□□□ -0.14
VMP1-206ENST00000587945 ARHGAP25P42331 645 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 FASLGP48023 281 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 SQSTM1Q13501 440 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 PDK1Q15118 436 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 SNAP47Q5SQN1 464 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.2□□□□□ -0.14
VMP1-206ENST00000587945 TMEM164Q5U3C3 297 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 MFSD7Q6UXD7 560 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 NT5DC3Q86UY8 548 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 DTX1Q86Y01 620 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 RAVER1Q8IY67 606 aaKnown RBP14.2□□□□□ -0.14
VMP1-206ENST00000587945 EXD3Q8N9H8 876 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 GPR26Q8NDV2 337 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 SPATA22Q8NHS9 363 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 EXTL1Q92935 676 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 SGF29Q96ES7 293 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 IMP4Q96G21 291 aaKnown RBP14.2□□□□□ -0.14
VMP1-206ENST00000587945 AHCYL2Q96HN2 611 aaKnown RBP14.2□□□□□ -0.14
VMP1-206ENST00000587945 SPATA16Q9BXB7 569 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 OR2AG1Q9H205 316 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 ZFYVE1Q9HBF4 777 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 OCIAD1Q9NX40 245 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 ATXN10Q9UBB4 475 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 PCDHB11Q9Y5F2 797 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 UNC13CQ8NB66 2214 aa14.2□□□□□ -0.14
VMP1-206ENST00000587945 GCN1Q92616 2671 aaKnown RBP14.19□□□□□ -0.14
VMP1-206ENST00000587945 RGSL1A5PLK6 1076 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 A8MU76 341 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 GRID2O43424 1007 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 NUAK1O60285 661 aa14.19□□□□□ -0.14
VMP1-206ENST00000587945 MT-CYBP00156 380 aaPredicted RBP14.19□□□□□ -0.14
VMP1-206ENST00000587945 PTMSP20962 102 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms