RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 ADGRE1Q14246 886 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 PON2Q15165 354 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 TERF2Q15554 542 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 SMAD2Q15796 467 aaKnown RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 PDK4Q16654 411 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 SYTL3Q4VX76 610 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 N4BP2L1Q5TBK1 243 aaPredicted RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 HECTD2Q5U5R9 776 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 EGFLAMQ63HQ2 1017 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 PTCRAQ6ISU1 281 aaPredicted RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 FRA10AC1Q70Z53 315 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 ERN2Q76MJ5 926 aaKnown RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 PARS2Q7L3T8 475 aaKnown RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 RAB44Q7Z6P3 723 aaPredicted RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 CMC1Q7Z7K0 106 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 KBTBD6Q86V97 674 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 PHYKPLQ8IUZ5 450 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 MMAAQ8IVH4 418 aaKnown RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 NRSN1Q8IZ57 195 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 TTC30BQ8N4P2 665 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 NKAPQ8N5F7 415 aaKnown RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 ARMC2Q8NEN0 867 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 ST13P5Q8NFI4 369 aaPredicted RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 BCAS4Q8TDM0 211 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 FRS2Q8WU20 508 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 MZB1Q8WU39 189 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 ATXN2LQ8WWM7 1075 aaKnown RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 ISL2Q96A47 359 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 GRAMD1AQ96CP6 724 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 NUS1Q96E22 293 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 SERAC1Q96JX3 654 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 COPS8Q99627 209 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 PLCD4Q9BRC7 762 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 TMEM245Q9H330 911 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 FAM96AQ9H5X1 160 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 CCDC134Q9H6E4 229 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 KCNK12Q9HB15 430 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 MLXIPLQ9NP71 852 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 WDR70Q9NW82 654 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 CACNA2D2Q9NY47 1150 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 IL17CQ9P0M4 197 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 FBXL21Q9UKT6 434 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 TMCO1Q9UM00 188 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 CRYL1Q9Y2S2 319 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 MTO1Q9Y2Z2 717 aaKnown RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 STARD13Q9Y3M8 1113 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 KCTD3Q9Y597 815 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 PLXND1Q9Y4D7 1925 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 MYO10Q9HD67 2058 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 CCDC189A1A4V9 331 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 SYCE1LA8MT33 242 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 A8MX80 341 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 WNT9AO14904 365 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 GIPC1O14908 333 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 AURKAO14965 403 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 PHGDHO43175 533 aaKnown RBP6.15□□□□□ -1.42
LIG3-206ENST00000586058 TSPAN6O43657 245 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 DNAJC6O75061 913 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 SMIM24O75264 130 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 RNASEH2AO75792 299 aaKnown RBP6.15□□□□□ -1.42
LIG3-206ENST00000586058 HAUS5O94927 633 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 SNUPNO95149 360 aaKnown RBP6.15□□□□□ -1.42
LIG3-206ENST00000586058 KLHL2O95198 593 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 PCDH8O95206 1070 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 S1PR4O95977 384 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 FAM107AO95990 144 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 C1QAP02745 245 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 FTH1P02794 183 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 C2P06681 752 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 PKMP14618 531 aaKnown RBP6.15□□□□□ -1.42
LIG3-206ENST00000586058 BPIP17213 487 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 CHRM3P20309 590 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 RPS3P23396 243 aaKnown RBP eCLIP6.15□□□□□ -1.42
LIG3-206ENST00000586058 GRK2P25098 689 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 ARNTP27540 789 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 FMO4P31512 558 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 MAGEA12P43365 314 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 ABCG1P45844 678 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 MAPK9P45984 424 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 SOX9P48436 509 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 SERPINB4P48594 390 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 SPINT3P49223 89 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 GALK1P51570 392 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 ARSDP51689 593 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 ADARP55265 1226 aaKnown RBP6.15□□□□□ -1.42
LIG3-206ENST00000586058 ATP6V0D1P61421 351 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 NAA20P61599 178 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 TDGQ13569 410 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 PDE1CQ14123 709 aaPredicted RBP6.15□□□□□ -1.42
LIG3-206ENST00000586058 LAPTM4AQ15012 233 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 ZKSCAN8Q15776 578 aaPredicted RBP6.15□□□□□ -1.42
LIG3-206ENST00000586058 CST6Q15828 149 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 CRY1Q16526 586 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 GAB4Q2WGN9 574 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 POM121L1PQ3SYA9 428 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 LEXMQ3ZCV2 418 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 C2orf27AQ580R0 203 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 LRRC73Q5JTD7 316 aa6.15□□□□□ -1.42
LIG3-206ENST00000586058 CFAP157Q5JU67 520 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms