RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 GALNT13Q8IUC8 556 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 RBFAQ8N0V3 343 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 AVL9Q8NBF6 648 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 GPBAR1Q8TDU6 330 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 HEXDCQ8WVB3 486 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 TSACCQ96A04 125 aaPredicted RBP13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 APOLD1Q96LR9 279 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 OR2M4Q96R27 311 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 LGR4Q9BXB1 951 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 TRIM39Q9HCM9 518 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 CYP4F12Q9HCS2 524 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 UCKL1Q9NWZ5 548 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 TOR4AQ9NXH8 423 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 RIMKLBQ9ULI2 386 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 NEUROG3Q9Y4Z2 214 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 SPO11Q9Y5K1 396 aa13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 TDRD6O60522 2096 aaKnown RBP13.71□□□□□ -0.21
PRKCSH-202ENST00000585540 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 GLYATL1P3A0A0U1RQE8 302 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 CTAGE9A4FU28 777 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 EME2A4GXA9 379 aaPredicted RBP13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 TRIM38O00635 465 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 FFAR2O15552 330 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 SLC25A14O95258 325 aaPredicted RBP13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 METTL18O95568 372 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 AGTP01019 485 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 PIRTP0C851 137 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 PNLIPP16233 465 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 LMAN1P49257 510 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 CLCNKAP51800 687 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 ETF1P62495 437 aaKnown RBP13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 SARNPP82979 210 aaKnown RBP13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 KCTD19Q17RG1 926 aaPredicted RBP13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 LDLRAP1Q5SW96 308 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 SYT10Q6XYQ8 523 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 NYAP1Q6ZVC0 841 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 TMPRSS12Q86WS5 348 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 PELI3Q8N2H9 469 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 PRELID2Q8N945 189 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 GPR26Q8NDV2 337 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 STYXQ8WUJ0 223 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 ULK4Q96C45 1275 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 GRAMD1AQ96CP6 724 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 EID2BQ96D98 161 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 ZNF514Q96K75 400 aaPredicted RBP13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 CAPZA3Q96KX2 299 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 C16orf45Q96MC5 204 aaPredicted RBP13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 AP1M1Q9BXS5 423 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 MOSPD1Q9UJG1 213 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 SUFUQ9UMX1 484 aa13.7□□□□□ -0.22
PRKCSH-202ENST00000585540 DCHS1Q96JQ0 3298 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 MED19A0JLT2 244 aaPredicted RBP13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 HEATR9A2RTY3 570 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 FADS2P1A8MWK0 482 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 YY2O15391 372 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 NUAK1O60285 661 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 ASMTLO95671 621 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 PSMA3P25788 255 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 GTF2H3Q13889 308 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 PTPRRQ15256 657 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 SMAD1Q15797 465 aaKnown RBP13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 CLPPQ16740 277 aaPredicted RBP13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 DEFB133Q30KQ1 61 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 GPR33Q49SQ1 333 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 PYCR3Q53H96 274 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 DENND5AQ6IQ26 1287 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 OGFOD3Q6PK18 319 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 PPP1R21Q6ZMI0 780 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 NLRP9Q7RTR0 991 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 TMPRSS7Q7RTY8 843 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 RD3Q7Z3Z2 195 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 TAF8Q7Z7C8 310 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 PRUNE1Q86TP1 453 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 PDCD7Q8N8D1 485 aaKnown RBP13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 DDHD1Q8NEL9 900 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 SMIM14Q96QK8 99 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 RANBP9Q96S59 729 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 CLPBQ9H078 707 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 TCEAL2Q9H3H9 227 aaPredicted RBP13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 ETNK1Q9HBU6 452 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 RAB6BQ9NRW1 208 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 CNOT6Q9ULM6 557 aaKnown RBP13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 PNMA8BQ9ULN7 279 aaPredicted RBP13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 SAR1BQ9Y6B6 198 aa13.69□□□□□ -0.22
PRKCSH-202ENST00000585540 CHUKO15111 745 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 INPP4BO15327 924 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 DNAJC6O75061 913 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 PHF2O75151 1096 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 TCEA3O75764 348 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 SLC4A1P02730 911 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 ETS1P14921 441 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 VCLP18206 1134 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 TPSB2P20231 275 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 ITGALP20701 1170 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 CASQ1P31415 396 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 ADCY8P40145 1251 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 GNPDA1P46926 289 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 KCNJ1P48048 391 aa13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 ZNF140P52738 457 aaPredicted RBP13.68□□□□□ -0.22
PRKCSH-202ENST00000585540 MSLNQ13421 630 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms