RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	IL17B	Q9UHF5	180 aa		15.02	■□□□□ -0
SREBF1-222	ENST00000583732	BOD1L1	Q8NFC6	3051 aa		15.02	□□□□□ -0.01
SREBF1-222	ENST00000583732		A0A087X0T9	212 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	FADS2P1	A8MWK0	482 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	MYO1F	O00160	1098 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	MATN3	O15232	486 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	DNAJC6	O75061	913 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	PRL	P01236	227 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	SERPING1	P05155	500 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	CYP1A2	P05177	515 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	FAM228B	P0C875	321 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	CA4	P22748	312 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	ARSE	P51690	589 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	LRP8	Q14114	963 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	IFI16	Q16666	785 aa	Known RBP	15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	ANKRD20A8P	Q5CZ79	823 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	CAVIN1	Q6NZI2	390 aa	Known RBP	15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	BORA	Q6PGQ7	559 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	LRRC49	Q8IUZ0	686 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	KCTD6	Q8NC69	237 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	ARRDC2	Q8TBH0	407 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	ZNF564	Q8TBZ8	553 aa	Predicted RBP	15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	FAM71B	Q8TC56	605 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	NCSTN	Q92542	709 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	WDR24	Q96S15	920 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	DPYSL5	Q9BPU6	564 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	SLC25A18	Q9H1K4	315 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	STN1	Q9H668	368 aa	Known RBP	15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	ARFGAP3	Q9NP61	516 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	TBC1D29	Q9UFV1	150 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	DNPEP	Q9ULA0	475 aa		15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732	ZNF106	Q9H2Y7	1883 aa	Known RBP	15.01	□□□□□ -0.01
SREBF1-222	ENST00000583732		B4E171	279 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	SUV39H1	O43463	412 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	SLC4A1	P02730	911 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	PRKAR1A	P10644	381 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	TSPAN7	P41732	249 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	CD86	P42081	329 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	RAB15	P59190	212 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	TAS2R40	P59535	323 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	GBE1	Q04446	702 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	SQSTM1	Q13501	440 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	GALNT3	Q14435	633 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	IQCB1	Q15051	598 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	FIGN	Q5HY92	759 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	ZFYVE27	Q5T4F4	411 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	ZNF648	Q5T619	568 aa	Predicted RBP	15	□□□□□ -0.01
SREBF1-222	ENST00000583732	ALS2CL	Q60I27	953 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	ALG1L	Q6GMV1	187 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	UNC5B	Q8IZJ1	945 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	BMPER	Q8N8U9	685 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	CCNY	Q8ND76	341 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	TBC1D10A	Q9BXI6	508 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	ASPSCR1	Q9BZE9	553 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	APMAP	Q9HDC9	416 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	HAUS2	Q9NVX0	235 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	GEMIN8	Q9NWZ8	242 aa	Known RBP	15	□□□□□ -0.01
SREBF1-222	ENST00000583732	PKD2L2	Q9NZM6	624 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	VPS18	Q9P253	973 aa		15	□□□□□ -0.01
SREBF1-222	ENST00000583732	CNOT6	Q9ULM6	557 aa	Known RBP	15	□□□□□ -0.01
SREBF1-222	ENST00000583732	BZW2	Q9Y6E2	419 aa	Known RBP	15	□□□□□ -0.01
SREBF1-222	ENST00000583732	ZNF891	A8MT65	544 aa	Predicted RBP	14.99	□□□□□ -0.01
SREBF1-222	ENST00000583732	CCNC	P24863	283 aa		14.99	□□□□□ -0.01
SREBF1-222	ENST00000583732	SPINT3	P49223	89 aa		14.99	□□□□□ -0.01
SREBF1-222	ENST00000583732	POLE2	P56282	527 aa		14.99	□□□□□ -0.01
SREBF1-222	ENST00000583732	FANCC	Q00597	558 aa		14.99	□□□□□ -0.01
SREBF1-222	ENST00000583732	KCNAB2	Q13303	367 aa		14.99	□□□□□ -0.01
SREBF1-222	ENST00000583732	QPCT	Q16769	361 aa		14.99	□□□□□ -0.01
SREBF1-222	ENST00000583732	PLA2G4E	Q3MJ16	856 aa		14.99	□□□□□ -0.01
SREBF1-222	ENST00000583732	HENMT1	Q5T8I9	393 aa	Known RBP	14.99	□□□□□ -0.01
SREBF1-222	ENST00000583732	ALKBH5	Q6P6C2	394 aa	Known RBP	14.99	□□□□□ -0.01
SREBF1-222	ENST00000583732	SLC9B2	Q86UD5	537 aa		14.99	□□□□□ -0.01
SREBF1-222	ENST00000583732	NLRP8	Q86W28	1048 aa		14.99	□□□□□ -0.01
SREBF1-222	ENST00000583732	RTP4	Q96DX8	246 aa		14.99	□□□□□ -0.01
SREBF1-222	ENST00000583732	ZNF670	Q9BS34	389 aa		14.99	□□□□□ -0.01
SREBF1-222	ENST00000583732	CEP41	Q9BYV8	373 aa		14.99	□□□□□ -0.01
SREBF1-222	ENST00000583732	OSGEPL1	Q9H4B0	414 aa		14.99	□□□□□ -0.01
SREBF1-222	ENST00000583732	FAM83D	Q9H4H8	585 aa		14.99	□□□□□ -0.01
SREBF1-222	ENST00000583732	GPN2	Q9H9Y4	310 aa	Predicted RBP	14.99	□□□□□ -0.01
SREBF1-222	ENST00000583732	CTTNBP2NL	Q9P2B4	639 aa		14.99	□□□□□ -0.01
SREBF1-222	ENST00000583732	LOC101059948	A0A1B0GTJ6	334 aa		14.98	□□□□□ -0.01
SREBF1-222	ENST00000583732		A0A1W2PQJ5	194 aa		14.98	□□□□□ -0.01
SREBF1-222	ENST00000583732	KCNK1	O00180	336 aa		14.98	□□□□□ -0.01
SREBF1-222	ENST00000583732	NKX2-8	O15522	239 aa		14.98	□□□□□ -0.01
SREBF1-222	ENST00000583732	JCHAIN	P01591	159 aa		14.98	□□□□□ -0.01
SREBF1-222	ENST00000583732	MMP2	P08253	660 aa		14.98	□□□□□ -0.01
SREBF1-222	ENST00000583732	CES1	P23141	567 aa		14.98	□□□□□ -0.01
SREBF1-222	ENST00000583732	TLE1	Q04724	770 aa		14.98	□□□□□ -0.01
SREBF1-222	ENST00000583732	IYD	Q6PHW0	289 aa		14.98	□□□□□ -0.01
SREBF1-222	ENST00000583732	CEACAM20	Q6UY09	585 aa		14.98	□□□□□ -0.01
SREBF1-222	ENST00000583732	LYSMD3	Q7Z3D4	306 aa		14.98	□□□□□ -0.01
SREBF1-222	ENST00000583732	CCDC13	Q8IYE1	715 aa		14.98	□□□□□ -0.01
SREBF1-222	ENST00000583732	NLGN4X	Q8N0W4	816 aa		14.98	□□□□□ -0.01
SREBF1-222	ENST00000583732	PQLC3	Q8N755	202 aa		14.98	□□□□□ -0.01
SREBF1-222	ENST00000583732	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	14.98	□□□□□ -0.01
SREBF1-222	ENST00000583732	CCHCR1	Q8TD31	782 aa		14.98	□□□□□ -0.01
SREBF1-222	ENST00000583732	TSGA13	Q96PP4	275 aa		14.98	□□□□□ -0.01
SREBF1-222	ENST00000583732	HERPUD2	Q9BSE4	406 aa		14.98	□□□□□ -0.01
SREBF1-222	ENST00000583732	MLPH	Q9BV36	600 aa	Predicted RBP	14.98	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms