RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 STAMBPL1Q96FJ0 436 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 SCRN2Q96FV2 425 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 PCMTD1Q96MG8 357 aaPredicted RBP12.2□□□□□ -0.46
TOP3A-215ENST00000583328 NAP1L5Q96NT1 182 aaPredicted RBP12.2□□□□□ -0.46
TOP3A-215ENST00000583328 TWSG1Q9GZX9 223 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 RBSNQ9H1K0 784 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 ABCG8Q9H221 673 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 SEPT11Q9NVA2 429 aaKnown RBP12.2□□□□□ -0.46
TOP3A-215ENST00000583328 CNOT8Q9UFF9 292 aaKnown RBP12.2□□□□□ -0.46
TOP3A-215ENST00000583328 AP4E1Q9UPM8 1137 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 OAS3Q9Y6K5 1087 aaKnown RBP12.2□□□□□ -0.46
TOP3A-215ENST00000583328 CACNA1DQ01668 2161 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 NPIPB15A6NHN6 443 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-215ENST00000583328 SNX2O60749 519 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 KIAA0754O94854 1291 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 DDAH2O95865 285 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 SOD1P00441 154 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 PDGFAP04085 211 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 TPM3P06753 285 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 CCNYL3P0C7X3 344 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 RNF224P0DH78 156 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 SLC2A4P14672 509 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 CTPS1P17812 591 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 POLR2FP61218 127 aaKnown RBP12.19□□□□□ -0.46
TOP3A-215ENST00000583328 SLC10A7Q0GE19 358 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 NR1I3Q14994 352 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 CA9Q16790 459 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 CLEC16AQ2KHT3 1053 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 ARMC12Q5T9G4 340 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 ZNF787Q6DD87 383 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 RFX8Q6ZV50 586 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 USP45Q70EL2 814 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 CHST15Q7LFX5 561 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-215ENST00000583328 LYSMD3Q7Z3D4 306 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 GAS2L3Q86XJ1 694 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 RASGRP3Q8IV61 690 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 NEK11Q8NG66 645 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 ELMO2Q96JJ3 720 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 NUDCD1Q96RS6 583 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 TBC1D10AQ9BXI6 508 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 GANQ9H2C0 597 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 EPB41L1Q9H4G0 881 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 NOD2Q9HC29 1040 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 NLRC4Q9NPP4 1024 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 CASS4Q9NQ75 786 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 FAM207AQ9NSI2 230 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-215ENST00000583328 SIDT1Q9NXL6 827 aaKnown RBP12.19□□□□□ -0.46
TOP3A-215ENST00000583328 IFNKQ9P0W0 207 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 TBC1D29Q9UFV1 150 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 PRKAB1Q9Y478 270 aa12.19□□□□□ -0.46
TOP3A-215ENST00000583328 A0A0U1RQS6 177 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 EIF3CLB5ME19 914 aaKnown RBP12.18□□□□□ -0.46
TOP3A-215ENST00000583328 CBFA2T2O43439 604 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 CREG1O75629 220 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 DNAJB5O75953 348 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 NDUFA10O95299 355 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 PYGLP06737 847 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 ANKRD34CP0C6C1 535 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 TNFAIP3P21580 790 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 COL8A1P27658 744 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 CASP14P31944 242 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 HSPA9P38646 679 aaKnown RBP12.18□□□□□ -0.46
TOP3A-215ENST00000583328 KLK7P49862 253 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 SEPHS1P49903 392 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 TRAF2Q12933 501 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 ERMARDQ5T6L9 678 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 APLFQ8IW19 511 aaPredicted RBP12.18□□□□□ -0.46
TOP3A-215ENST00000583328 NDUFAF2Q8N183 169 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 BBS5Q8N3I7 341 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 NPWQ8N729 165 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 SCAMP4Q969E2 229 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 ZNF599Q96NL3 588 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 OR6C1Q96RD1 312 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 KCTD15Q96SI1 283 aaPredicted RBP12.18□□□□□ -0.46
TOP3A-215ENST00000583328 EIF3CQ99613 913 aaKnown RBP12.18□□□□□ -0.46
TOP3A-215ENST00000583328 HERPUD2Q9BSE4 406 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 PCSK1NQ9UHG2 260 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 LNPEPQ9UIQ6 1025 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 PADI1Q9ULC6 663 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 KCNK6Q9Y257 313 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 MAP4K5Q9Y4K4 846 aa12.18□□□□□ -0.46
TOP3A-215ENST00000583328 KIR2DS5A0A0G2JLQ3 304 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 A0A0G2JNG1 304 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 TCRBV5S1A1TA0A578 114 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 OR5K4A6NMS3 321 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 KIR2DS3K7RE56 304 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 PGLSO95336 258 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 RECKO95980 971 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 AMD1P17707 334 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 PGDP52209 483 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 GFERP55789 205 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 SH3BP2P78314 561 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 SEMA5AQ13591 1074 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 DNASE1L3Q13609 305 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 IL11RAQ14626 422 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 KIR2DS5Q14953 304 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 EIF2S3LQ2VIR3 472 aaKnown RBP12.17□□□□□ -0.46
TOP3A-215ENST00000583328 NADK2Q4G0N4 442 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 LRRC66Q68CR7 880 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 SARM1Q6SZW1 724 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms