RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	WNT3A	P56704	352 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	PCBP4	P57723	403 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	CCL7	P80098	99 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ADCY2	Q08462	1091 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	GALNT3	Q14435	633 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ZNF569	Q5MCW4	686 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	CCDC181	Q5TID7	509 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ITPRIPL1	Q6GPH6	555 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	NYAP1	Q6ZVC0	841 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	PID1	Q7Z2X4	250 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SPRED1	Q7Z699	444 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ZC3H18	Q86VM9	953 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ZNF567	Q8N184	647 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	RNF10	Q8N5U6	811 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	TTC13	Q8NBP0	860 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SPATA22	Q8NHS9	363 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	CCL4L1	Q8NHW4	92 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ATXN7L3B	Q96GX2	97 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SLC46A1	Q96NT5	459 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SMIM14	Q96QK8	99 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	AGAP2	Q99490	1192 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	C19orf43	Q9BQ61	176 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	CEP41	Q9BYV8	373 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	OSBPL8	Q9BZF1	889 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	DPH1	Q9BZG8	443 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	LACRT	Q9GZZ8	138 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	CNOT6	Q9ULM6	557 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	TFR2	Q9UP52	801 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	RNF215	Q9Y6U7	377 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ADAMTS20	P59510	1910 aa		12.49	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708		A0A0U1RQS6	177 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708		A0A1W2PQM1	296 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	OR5K4	A6NMS3	321 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	RHPN2P1	A8MT19	583 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	TLX3	O43711	291 aa	Predicted RBP	12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	DNAJC6	O75061	913 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	PMPCB	O75439	489 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ASMTL	O95671	621 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	MT-CYB	P00156	380 aa	Predicted RBP	12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	MPO	P05164	745 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ITGA2B	P08514	1039 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	NFKB1	P19838	968 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ACTR1B	P42025	376 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ABCG1	P45844	678 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	FASLG	P48023	281 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	PDX1	P52945	283 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	UCN	P55089	124 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	GSDMD	P57764	484 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ACTR1A	P61163	376 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ZFP36L1	Q07352	338 aa	Known RBP	12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	PCSK7	Q16549	785 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	DOK6	Q6PKX4	331 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	KDELC1	Q6UW63	502 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	CLEC14A	Q86T13	490 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	TMEM139	Q8IV31	216 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	CDKL3	Q8IVW4	592 aa	Predicted RBP	12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	UBL4B	Q8N7F7	174 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	EID2B	Q96D98	161 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	VPS35	Q96QK1	796 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	HERPUD2	Q9BSE4	406 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	HEMGN	Q9BXL5	484 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	B3GNT4	Q9C0J1	378 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	TRIM39	Q9HCM9	518 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ASCL3	Q9NQ33	180 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	RABGEF1	Q9UJ41	708 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	AMFR	Q9UKV5	643 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SATB2	Q9UPW6	733 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	TMEM98	Q9Y2Y6	226 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	AAR2	Q9Y312	384 aa	Known RBP	12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	PCDHGA7	Q9Y5G6	932 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	DUSP10	Q9Y6W6	482 aa		12.48	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	UNC13C	Q8NB66	2214 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	GRID2IP	A4D2P6	1211 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	GOLGA6L9	A6NEM1	432 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	FADS2P1	A8MWK0	482 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708		H7C0C1	242 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	PLD2	O14939	933 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	INPP4B	O15327	924 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	VEGFD	O43915	354 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	NUAK1	O60285	661 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SLC25A14	O95258	325 aa	Predicted RBP	12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ECEL1	O95672	775 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	CPNE6	O95741	557 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	AK4	P27144	223 aa	Predicted RBP	12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ATP5O	P48047	213 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	GEM	P55040	296 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	GPLD1	P80108	840 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	B4GALNT1	Q00973	533 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	OTUD4	Q01804	1114 aa	Known RBP	12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	BIRC2	Q13490	618 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	TCEA2	Q15560	299 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SLC1A5	Q15758	541 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	C3orf38	Q5JPI3	329 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SLC30A9	Q6PML9	568 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	PEX26	Q7Z412	305 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	KDELC2	Q7Z4H8	507 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	PIM3	Q86V86	326 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	PHYKPL	Q8IUZ5	450 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	NAGS	Q8N159	534 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SFRP1	Q8N474	314 aa		12.47	□□□□□ -0.41

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