RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 MARCKSL1P49006 195 aa13.3□□□□□ -0.28
TRAF4-214ENST00000580073 EPHB1P54762 984 aa13.3□□□□□ -0.28
TRAF4-214ENST00000580073 CTBSQ01459 385 aa13.3□□□□□ -0.28
TRAF4-214ENST00000580073 SQSTM1Q13501 440 aa13.3□□□□□ -0.28
TRAF4-214ENST00000580073 TMEM71Q6P5X7 295 aa13.3□□□□□ -0.28
TRAF4-214ENST00000580073 ADAMTSL4Q6UY14 1074 aa13.3□□□□□ -0.28
TRAF4-214ENST00000580073 ZNF574Q6ZN55 896 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-214ENST00000580073 POLNQ7Z5Q5 900 aa13.3□□□□□ -0.28
TRAF4-214ENST00000580073 FAM129CQ86XR2 697 aa13.3□□□□□ -0.28
TRAF4-214ENST00000580073 TP53INP2Q8IXH6 220 aa13.3□□□□□ -0.28
TRAF4-214ENST00000580073 NAGSQ8N159 534 aa13.3□□□□□ -0.28
TRAF4-214ENST00000580073 LRRC57Q8N9N7 239 aa13.3□□□□□ -0.28
TRAF4-214ENST00000580073 TEKT4Q8WW24 435 aa13.3□□□□□ -0.28
TRAF4-214ENST00000580073 RAPGEF5Q92565 580 aa13.3□□□□□ -0.28
TRAF4-214ENST00000580073 SH3KBP1Q96B97 665 aa13.3□□□□□ -0.28
TRAF4-214ENST00000580073 AP2M1Q96CW1 435 aa13.3□□□□□ -0.28
TRAF4-214ENST00000580073 SLC38A3Q99624 504 aa13.3□□□□□ -0.28
TRAF4-214ENST00000580073 NUDT22Q9BRQ3 303 aa13.3□□□□□ -0.28
TRAF4-214ENST00000580073 POLR1EQ9GZS1 481 aaKnown RBP13.3□□□□□ -0.28
TRAF4-214ENST00000580073 EPB41L1Q9H4G0 881 aa13.3□□□□□ -0.28
TRAF4-214ENST00000580073 NOD2Q9HC29 1040 aa13.3□□□□□ -0.28
TRAF4-214ENST00000580073 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRAF4-214ENST00000580073 SPATS2LQ9NUQ6 558 aaKnown RBP13.3□□□□□ -0.28
TRAF4-214ENST00000580073 SLC39A1Q9NY26 324 aa13.3□□□□□ -0.28
TRAF4-214ENST00000580073 RCOR3Q9P2K3 495 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-214ENST00000580073 IGHV1OR21-1A0A087WYE8 117 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 C3orf70A6NLC5 250 aaPredicted RBP13.29□□□□□ -0.28
TRAF4-214ENST00000580073 AGRPO00253 132 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 SUV39H1O43463 412 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 B4GAT1O43505 415 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 LHCGRP22888 699 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 AMPD1P23109 780 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 AK4P27144 223 aaPredicted RBP13.29□□□□□ -0.28
TRAF4-214ENST00000580073 CD1CP29017 333 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 CCR10P46092 362 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 MC1RQ01726 317 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 TRAF2Q12933 501 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 SRSF6Q13247 344 aaKnown RBP13.29□□□□□ -0.28
TRAF4-214ENST00000580073 DOK6Q6PKX4 331 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 CEACAM20Q6UY09 585 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 NYAP1Q6ZVC0 841 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 TMPRSS9Q7Z410 1059 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 HSD11B1LQ7Z5J1 315 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 KIAA1328Q86T90 577 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 NLRP8Q86W28 1048 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 NRROSQ86YC3 692 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 NRSN1Q8IZ57 195 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 CACNA2D3Q8IZS8 1091 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 RCBTB1Q8NDN9 531 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 ART4Q93070 314 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 NKD1Q969G9 470 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 SCARF2Q96GP6 870 aaPredicted RBP13.29□□□□□ -0.28
TRAF4-214ENST00000580073 HERPUD2Q9BSE4 406 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 TRIM4Q9C037 500 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 TRIT1Q9H3H1 467 aaKnown RBP13.29□□□□□ -0.28
TRAF4-214ENST00000580073 VPS18Q9P253 973 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 AMACRQ9UHK6 382 aa13.29□□□□□ -0.28
TRAF4-214ENST00000580073 MACROD2A1Z1Q3 448 aa13.28□□□□□ -0.28
TRAF4-214ENST00000580073 MAFKO60675 156 aa13.28□□□□□ -0.28
TRAF4-214ENST00000580073 FGF3P11487 239 aaPredicted RBP13.28□□□□□ -0.28
TRAF4-214ENST00000580073 CCL4P13236 92 aa13.28□□□□□ -0.28
TRAF4-214ENST00000580073 ITGB6P18564 788 aa13.28□□□□□ -0.28
TRAF4-214ENST00000580073 UGT1A3P35503 534 aa13.28□□□□□ -0.28
TRAF4-214ENST00000580073 EPHA4P54764 986 aa13.28□□□□□ -0.28
TRAF4-214ENST00000580073 DPYSL3Q14195 570 aa13.28□□□□□ -0.28
TRAF4-214ENST00000580073 KRT81Q14533 505 aa13.28□□□□□ -0.28
TRAF4-214ENST00000580073 LRRC66Q68CR7 880 aa13.28□□□□□ -0.28
TRAF4-214ENST00000580073 C11orf63Q6NUN7 778 aa13.28□□□□□ -0.28
TRAF4-214ENST00000580073 Q6ZVL8 140 aa13.28□□□□□ -0.28
TRAF4-214ENST00000580073 PELI3Q8N2H9 469 aa13.28□□□□□ -0.28
TRAF4-214ENST00000580073 EXD1Q8NHP7 514 aa13.28□□□□□ -0.28
TRAF4-214ENST00000580073 KRT35Q92764 455 aa13.28□□□□□ -0.28
TRAF4-214ENST00000580073 CSPG4P5Q96PW8 444 aa13.28□□□□□ -0.28
TRAF4-214ENST00000580073 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.28□□□□□ -0.28
TRAF4-214ENST00000580073 RMI1Q9H9A7 625 aa13.28□□□□□ -0.28
TRAF4-214ENST00000580073 PPIL1Q9Y3C6 166 aa13.28□□□□□ -0.28
TRAF4-214ENST00000580073 CAPN6Q9Y6Q1 641 aa13.28□□□□□ -0.28
TRAF4-214ENST00000580073 TLN1Q9Y490 2541 aaKnown RBP13.28□□□□□ -0.28
TRAF4-214ENST00000580073 PYCARD-AS1I3L0S3 204 aa13.27□□□□□ -0.29
TRAF4-214ENST00000580073 RAD1O60671 282 aa13.27□□□□□ -0.29
TRAF4-214ENST00000580073 IPO7O95373 1038 aaKnown RBP13.27□□□□□ -0.29
TRAF4-214ENST00000580073 TNNT1P13805 278 aa13.27□□□□□ -0.29
TRAF4-214ENST00000580073 KDELR1P24390 212 aa13.27□□□□□ -0.29
TRAF4-214ENST00000580073 MAP4P27816 1152 aaKnown RBP13.27□□□□□ -0.29
TRAF4-214ENST00000580073 CSF2RBP32927 897 aa13.27□□□□□ -0.29
TRAF4-214ENST00000580073 SLC1A1P43005 524 aa13.27□□□□□ -0.29
TRAF4-214ENST00000580073 POLE2P56282 527 aa13.27□□□□□ -0.29
TRAF4-214ENST00000580073 MAXP61244 160 aa13.27□□□□□ -0.29
TRAF4-214ENST00000580073 RPL26P61254 145 aaKnown RBP13.27□□□□□ -0.29
TRAF4-214ENST00000580073 HHEXQ03014 270 aa13.27□□□□□ -0.29
TRAF4-214ENST00000580073 ITKQ08881 620 aa13.27□□□□□ -0.29
TRAF4-214ENST00000580073 KIF5AQ12840 1032 aa13.27□□□□□ -0.29
TRAF4-214ENST00000580073 KCNAB2Q13303 367 aa13.27□□□□□ -0.29
TRAF4-214ENST00000580073 HADHQ16836 314 aaKnown RBP13.27□□□□□ -0.29
TRAF4-214ENST00000580073 CYB5D1Q6P9G0 228 aa13.27□□□□□ -0.29
TRAF4-214ENST00000580073 WDR74Q6RFH5 385 aaPredicted RBP13.27□□□□□ -0.29
TRAF4-214ENST00000580073 TECPR1Q7Z6L1 1165 aa13.27□□□□□ -0.29
TRAF4-214ENST00000580073 SLC9B2Q86UD5 537 aa13.27□□□□□ -0.29
TRAF4-214ENST00000580073 SFTPA2Q8IWL1 248 aa13.27□□□□□ -0.29
TRAF4-214ENST00000580073 NLGN4XQ8N0W4 816 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms