RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 EME2A4GXA9 379 aaPredicted RBP6.5□□□□□ -1.37
TRAF4-213ENST00000578917 FAM221BA6H8Z2 402 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 TMEM8BA6NDV4 472 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 C5orf60A6NFR6 353 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 AURKAO14965 403 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 PSMD3O43242 534 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 USP12O75317 370 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 PPFIA2O75334 1257 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 CDK14O94921 469 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 FGGP02679 453 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 PROS1P07225 676 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 IVLP07476 585 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 GIMD1P0DJR0 217 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 ACP5P13686 325 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 GLB1P16278 677 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 BPIP17213 487 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 LPOP22079 712 aaPredicted RBP6.5□□□□□ -1.37
TRAF4-213ENST00000578917 AK4P27144 223 aaPredicted RBP6.5□□□□□ -1.37
TRAF4-213ENST00000578917 CXCR5P32302 372 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 HMGCLP35914 325 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 CCZ1BP86790 482 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 CCZ1P86791 482 aaPredicted RBP6.5□□□□□ -1.37
TRAF4-213ENST00000578917 INSM1Q01101 510 aaPredicted RBP6.5□□□□□ -1.37
TRAF4-213ENST00000578917 CYP4F3Q08477 520 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 GTF2H3Q13889 308 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 LRP8Q14114 963 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 SEPT6Q14141 434 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 SPIDRQ14159 915 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 SPARCL1Q14515 664 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 P3H1Q32P28 736 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 AMZ1Q400G9 498 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 KCTD16Q68DU8 428 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 FOXR1Q6PIV2 292 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 FAM151BQ6UXP7 276 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 PPP1R21Q6ZMI0 780 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 RBM44Q6ZP01 1051 aaKnown RBP6.5□□□□□ -1.37
TRAF4-213ENST00000578917 LINC00523Q86TU6 105 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 SLC13A5Q86YT5 568 aaPredicted RBP6.5□□□□□ -1.37
TRAF4-213ENST00000578917 PHYKPLQ8IUZ5 450 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 TRAM1L1Q8N609 369 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 DNAAF3Q8N9W5 541 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 KYQ8NBH2 561 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 GPR26Q8NDV2 337 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 CCL4L1Q8NHW4 92 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 WDR48Q8TAF3 677 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 GPBAR1Q8TDU6 330 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 ZCCHC14Q8WYQ9 949 aaKnown RBP6.5□□□□□ -1.37
TRAF4-213ENST00000578917 GLYATL1Q969I3 302 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 CCDC74AQ96AQ1 378 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 TADA1Q96BN2 335 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 MRGPRX2Q96LB1 330 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 GFM1Q96RP9 751 aaKnown RBP6.5□□□□□ -1.37
TRAF4-213ENST00000578917 TBL1YQ9BQ87 522 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 CCDC3Q9BQI4 270 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 FRMD8Q9BZ67 464 aaPredicted RBP6.5□□□□□ -1.37
TRAF4-213ENST00000578917 FRMD8P1Q9BZ68 369 aaPredicted RBP6.5□□□□□ -1.37
TRAF4-213ENST00000578917 CARD9Q9H257 536 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 OSGEPL1Q9H4B0 414 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 RMI1Q9H9A7 625 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 TRIM39Q9HCM9 518 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 HOMER3Q9NSC5 361 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 SPATS2LQ9NUQ6 558 aaKnown RBP6.5□□□□□ -1.37
TRAF4-213ENST00000578917 WDR70Q9NW82 654 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 TAAR2Q9P1P5 351 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 VPS18Q9P253 973 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 SPO11Q9Y5K1 396 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 KNTC1P50748 2209 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 GOLGA4Q13439 2230 aaKnown RBP6.49□□□□□ -1.37
TRAF4-213ENST00000578917 MAP1BP46821 2468 aaKnown RBP6.49□□□□□ -1.37
TRAF4-213ENST00000578917 TNRC6BQ9UPQ9 1833 aaKnown RBP6.49□□□□□ -1.37
TRAF4-213ENST00000578917 FADS2P1A8MWK0 482 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 AGRPO00253 132 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 GRID2O43424 1007 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 LIASO43766 372 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 VEGFDO43915 354 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 KIF5CO60282 957 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 UGT1A9O60656 530 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 CSO75390 466 aaKnown RBP6.49□□□□□ -1.37
TRAF4-213ENST00000578917 DKK1O94907 266 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 ECEL1O95672 775 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 SOD1P00441 154 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 FUCA1P04066 466 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 RPLP0P05388 317 aaKnown RBP6.49□□□□□ -1.37
TRAF4-213ENST00000578917 SLC2A4P14672 509 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 TPH1P17752 444 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 VCLP18206 1134 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 UGT1A6P19224 532 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 MSH3P20585 1137 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 UGT1A1P22309 533 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 UGT1A4P22310 534 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 RBMS1P29558 406 aaKnown RBP6.49□□□□□ -1.37
TRAF4-213ENST00000578917 AKT1P31749 480 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 UGT1A3P35503 534 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 UGT1A5P35504 534 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 SPAM1P38567 509 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 DCDC1P59894 354 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 CCL7P80098 99 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 TMPRSS15P98073 1019 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 ITGA9Q13797 1035 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 TAF1AQ15573 450 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms