RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 MCCC1Q96RQ3 725 aaPredicted RBP15.96■□□□□ 0.15
VAPA-204ENST00000577901 VAT1Q99536 393 aa15.96■□□□□ 0.15
VAPA-204ENST00000577901 APPL1Q9UKG1 709 aa15.96■□□□□ 0.15
VAPA-204ENST00000577901 DNPEPQ9ULA0 475 aa15.96■□□□□ 0.15
VAPA-204ENST00000577901 PACSIN2Q9UNF0 486 aaPredicted RBP15.96■□□□□ 0.15
VAPA-204ENST00000577901 LOXL2Q9Y4K0 774 aa15.96■□□□□ 0.15
VAPA-204ENST00000577901 COL6A6A6NMZ7 2263 aa15.96■□□□□ 0.14
VAPA-204ENST00000577901 BSNQ9UPA5 3926 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 A0A0J9YYE9 177 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 GOLGA6L9A6NEM1 432 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 TMEM202A6NGA9 273 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 NPIPB15A6NHN6 443 aaPredicted RBP15.95■□□□□ 0.14
VAPA-204ENST00000577901 CACNB4O00305 520 aaPredicted RBP15.95■□□□□ 0.14
VAPA-204ENST00000577901 HEXIM1O94992 359 aaKnown RBP15.95■□□□□ 0.14
VAPA-204ENST00000577901 WISP1O95388 367 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 TRBC1P01850 177 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 MMP2P08253 660 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 LIPCP11150 499 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 PTPN3P26045 913 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 CCZ1BP86790 482 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 CCZ1P86791 482 aaPredicted RBP15.95■□□□□ 0.14
VAPA-204ENST00000577901 ZFP36L1Q07352 338 aaKnown RBP15.95■□□□□ 0.14
VAPA-204ENST00000577901 NFATC3Q12968 1075 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 SRSF6Q13247 344 aaKnown RBP15.95■□□□□ 0.14
VAPA-204ENST00000577901 IHHQ14623 411 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 NOMO1Q15155 1222 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 CNGA3Q16281 694 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 LINC00303Q3SY05 128 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 CERCAMQ5T4B2 595 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 DENND2CQ68D51 928 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 OGFOD3Q6PK18 319 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 TAF8Q7Z7C8 310 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 FAM46DQ8NEK8 389 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 OR56A4Q8NGH8 313 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 ACTL9Q8TC94 416 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 OR1E3Q8WZA6 343 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 FUBP1Q96AE4 644 aaKnown RBP15.95■□□□□ 0.14
VAPA-204ENST00000577901 TMEM159Q96B96 161 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 QKIQ96PU8 341 aaKnown RBP eCLIP15.95■□□□□ 0.141e-14■■■■■ 35.1
VAPA-204ENST00000577901 ALS2CR12Q96Q35 445 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 FAM117AQ9C073 453 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 GLOD4Q9HC38 313 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 LZTFL1Q9NQ48 299 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 MRPL40Q9NQ50 206 aaKnown RBP15.95■□□□□ 0.14
VAPA-204ENST00000577901 KLHL8Q9P2G9 620 aaPredicted RBP15.95■□□□□ 0.14
VAPA-204ENST00000577901 TRHDEQ9UKU6 1024 aa15.95■□□□□ 0.14
VAPA-204ENST00000577901 LRP4O75096 1905 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 B4DGG1 531 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 AGRPO00253 132 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 DDX3YO15523 660 aaKnown RBP15.94■□□□□ 0.14
VAPA-204ENST00000577901 ZNF189O75820 626 aaPredicted RBP15.94■□□□□ 0.14
VAPA-204ENST00000577901 PRLP01236 227 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 PNLIPP16233 465 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 ZNF30P17039 623 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 ITIH1P19827 911 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 KIAA1024LP59773 190 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 OTUD4Q01804 1114 aaKnown RBP15.94■□□□□ 0.14
VAPA-204ENST00000577901 WASHC5Q12768 1159 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 SLC14A2Q15849 920 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 C14orf28Q4W4Y0 310 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 CCDC70Q6NSX1 233 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 AADACL2Q6P093 401 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 XKR5Q6UX68 686 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 PID1Q7Z2X4 250 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 SPRED1Q7Z699 444 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 CDKL3Q8IVW4 592 aaPredicted RBP15.94■□□□□ 0.14
VAPA-204ENST00000577901 SFTPA2Q8IWL1 248 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 TTC13Q8NBP0 860 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 LPCAT1Q8NF37 534 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 NUS1Q96E22 293 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 COQ10AQ96MF6 247 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 ARHGAP9Q9BRR9 750 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 MLPHQ9BV36 600 aaPredicted RBP15.94■□□□□ 0.14
VAPA-204ENST00000577901 FGF22Q9HCT0 170 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 LRIT1Q9P2V4 623 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 HEMK1Q9Y5R4 338 aaPredicted RBP15.94■□□□□ 0.14
VAPA-204ENST00000577901 RNF215Q9Y6U7 377 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 MYO18BQ8IUG5 2567 aa15.94■□□□□ 0.14
VAPA-204ENST00000577901 PRAMEF33A0A0G2JMD5 474 aa15.93■□□□□ 0.14
VAPA-204ENST00000577901 ANKRD66B4E2M5 251 aa15.93■□□□□ 0.14
VAPA-204ENST00000577901 PRAMEF10O60809 474 aa15.93■□□□□ 0.14
VAPA-204ENST00000577901 STK10O94804 968 aaKnown RBP15.93■□□□□ 0.14
VAPA-204ENST00000577901 ITGB2P05107 769 aa15.93■□□□□ 0.14
VAPA-204ENST00000577901 LHCGRP22888 699 aa15.93■□□□□ 0.14
VAPA-204ENST00000577901 KELP23276 732 aa15.93■□□□□ 0.14
VAPA-204ENST00000577901 TNNT3P45378 269 aaPredicted RBP15.93■□□□□ 0.14
VAPA-204ENST00000577901 EIF3EP60228 445 aaKnown RBP15.93■□□□□ 0.14
VAPA-204ENST00000577901 HLTFQ14527 1009 aaKnown RBP eCLIP15.93■□□□□ 0.14
VAPA-204ENST00000577901 MANEAQ5SRI9 462 aa15.93■□□□□ 0.14
VAPA-204ENST00000577901 LRRC66Q68CR7 880 aa15.93■□□□□ 0.14
VAPA-204ENST00000577901 PNCKQ6P2M8 343 aa15.93■□□□□ 0.14
VAPA-204ENST00000577901 HSD11B1LQ7Z5J1 315 aa15.93■□□□□ 0.14
VAPA-204ENST00000577901 CBARPQ8N350 705 aaPredicted RBP15.93■□□□□ 0.14
VAPA-204ENST00000577901 EXTL1Q92935 676 aa15.93■□□□□ 0.14
VAPA-204ENST00000577901 CMKLR1Q99788 373 aa15.93■□□□□ 0.14
VAPA-204ENST00000577901 HERPUD2Q9BSE4 406 aa15.93■□□□□ 0.14
VAPA-204ENST00000577901 TMEM168Q9H0V1 697 aa15.93■□□□□ 0.14
VAPA-204ENST00000577901 DPEP2Q9H4A9 486 aa15.93■□□□□ 0.14
VAPA-204ENST00000577901 PLSCR2Q9NRY7 297 aa15.93■□□□□ 0.14
VAPA-204ENST00000577901 LRRK1Q38SD2 2015 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms