RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 ATG4AQ8WYN0 398 aa15.14■□□□□ 0.01
SMG6-220ENST00000576218 CCDC74AQ96AQ1 378 aa15.14■□□□□ 0.01
SMG6-220ENST00000576218 TTC25Q96NG3 672 aa15.14■□□□□ 0.01
SMG6-220ENST00000576218 TBL1YQ9BQ87 522 aa15.14■□□□□ 0.01
SMG6-220ENST00000576218 TMEM121Q9BTD3 319 aa15.14■□□□□ 0.01
SMG6-220ENST00000576218 TAAR2Q9P1P5 351 aa15.14■□□□□ 0.01
SMG6-220ENST00000576218 VPS18Q9P253 973 aa15.14■□□□□ 0.01
SMG6-220ENST00000576218 ZNF148Q9UQR1 794 aa15.14■□□□□ 0.01
SMG6-220ENST00000576218 R3HDM2Q9Y2K5 976 aaKnown RBP15.14■□□□□ 0.01
SMG6-220ENST00000576218 U3KQA8 63 aa15.14■□□□□ 0.01
SMG6-220ENST00000576218 LRP4O75096 1905 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 TRABD2BA6NFA1 517 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 C2orf81A6NN90 581 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 FADS2P1A8MWK0 482 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 AURKAO14965 403 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 STX7O15400 261 aaKnown RBP15.13■□□□□ 0.01
SMG6-220ENST00000576218 ZW10O43264 779 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 IFNB1P01574 187 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 BPIP17213 487 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 HMGCLP35914 325 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 SPAM1P38567 509 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 KLF1Q13351 362 aaPredicted RBP15.13■□□□□ 0.01
SMG6-220ENST00000576218 LRP8Q14114 963 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 C14orf28Q4W4Y0 310 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 PERM1Q5SV97 790 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 PDPK2PQ6A1A2 396 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 RBM44Q6ZP01 1051 aaKnown RBP15.13■□□□□ 0.01
SMG6-220ENST00000576218 ZNF662Q6ZS27 426 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 SLC13A5Q86YT5 568 aaPredicted RBP15.13■□□□□ 0.01
SMG6-220ENST00000576218 TAB3Q8N5C8 712 aaPredicted RBP15.13■□□□□ 0.01
SMG6-220ENST00000576218 CCDC89Q8N998 374 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 Q8N9G6 341 aaPredicted RBP15.13■□□□□ 0.01
SMG6-220ENST00000576218 WDR48Q8TAF3 677 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 GPBAR1Q8TDU6 330 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 PTCD2Q8WV60 388 aaKnown RBP15.13■□□□□ 0.01
SMG6-220ENST00000576218 COX14Q96I36 57 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 PLEKHG4BQ96PX9 1271 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 FRMD8P1Q9BZ68 369 aaPredicted RBP15.13■□□□□ 0.01
SMG6-220ENST00000576218 OR2AG1Q9H205 316 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 CARD9Q9H257 536 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 RMI1Q9H9A7 625 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 ARFGAP3Q9NP61 516 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 PRKAB1Q9Y478 270 aa15.13■□□□□ 0.01
SMG6-220ENST00000576218 TCRBV7S2A1N4TA0A589 114 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 C5orf60A6NFR6 353 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 RHPN2P1A8MT19 583 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 E7EVH7 732 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 BUD23O43709 281 aaKnown RBP15.12■□□□□ 0.01
SMG6-220ENST00000576218 CSO75390 466 aaKnown RBP15.12■□□□□ 0.01
SMG6-220ENST00000576218 ACP5P13686 325 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 SNX1Q13596 522 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 SPARCL1Q14515 664 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 PARP6Q2NL67 630 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 PYCR3Q53H96 274 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 FAM151BQ6UXP7 276 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 MDM1Q8TC05 714 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 MAIP1Q8WWC4 291 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 C1orf54Q8WWF1 131 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 GLYATL1Q969I3 302 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 EID2BQ96D98 161 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 WDR24Q96S15 920 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 ZCCHC2Q9C0B9 1178 aaKnown RBP15.12■□□□□ 0.01
SMG6-220ENST00000576218 OSGEPL1Q9H4B0 414 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 LRRC40Q9H9A6 602 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.12■□□□□ 0.01
SMG6-220ENST00000576218 LRIT1Q9P2V4 623 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 NFKBIL1Q9UBC1 381 aaPredicted RBP15.12■□□□□ 0.01
SMG6-220ENST00000576218 ZMIZ1Q9ULJ6 1067 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 OAS3Q9Y6K5 1087 aaKnown RBP15.12■□□□□ 0.01
SMG6-220ENST00000576218 PTPRBP23467 1997 aa15.12■□□□□ 0.01
SMG6-220ENST00000576218 GLYATL1P3A0A0U1RQE8 302 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 PSMD3O43242 534 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 ZSCAN12O43309 604 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 GRID2O43424 1007 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 LIASO43766 372 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 CEP104O60308 925 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 SNX2O60749 519 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 USP12O75317 370 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 PPFIA2O75334 1257 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 CRTAMO95727 393 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 GAS8O95995 478 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 RPLP0P05388 317 aaKnown RBP15.11■□□□□ 0.01
SMG6-220ENST00000576218 GLB1P16278 677 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 LPOP22079 712 aaPredicted RBP15.11■□□□□ 0.01
SMG6-220ENST00000576218 MSNP26038 577 aaKnown RBP15.11■□□□□ 0.01
SMG6-220ENST00000576218 PDE1BQ01064 536 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 CYP4F3Q08477 520 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 ITGA9Q13797 1035 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 SEPT6Q14141 434 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 INSCQ1MX18 579 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 PLA2G4EQ3MJ16 856 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 ZNF648Q5T619 568 aaPredicted RBP15.11■□□□□ 0.01
SMG6-220ENST00000576218 CRTC3Q6UUV7 619 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 GSTA5Q7RTV2 222 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 DCBLD1Q8N8Z6 715 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 GPR156Q8NFN8 814 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 SLC35B2Q8TB61 432 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 GFM1Q96RP9 751 aaKnown RBP15.11■□□□□ 0.01
SMG6-220ENST00000576218 TMEM121BQ9BXQ6 578 aaPredicted RBP15.11■□□□□ 0.01
SMG6-220ENST00000576218 STN1Q9H668 368 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms