RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 SLC30A9Q6PML9 568 aa16.37■□□□□ 0.21
TVP23B-206ENST00000574226 LYSMD3Q7Z3D4 306 aa16.37■□□□□ 0.21
TVP23B-206ENST00000574226 TMC3Q7Z5M5 1100 aa16.37■□□□□ 0.21
TVP23B-206ENST00000574226 AVL9Q8NBF6 648 aa16.37■□□□□ 0.21
TVP23B-206ENST00000574226 HTR3CQ8WXA8 447 aa16.37■□□□□ 0.21
TVP23B-206ENST00000574226 AGAP2Q99490 1192 aa16.37■□□□□ 0.21
TVP23B-206ENST00000574226 GOLPH3Q9H4A6 298 aa16.37■□□□□ 0.21
TVP23B-206ENST00000574226 SUDS3Q9H7L9 328 aaPredicted RBP16.37■□□□□ 0.21
TVP23B-206ENST00000574226 KLHL8Q9P2G9 620 aaPredicted RBP16.37■□□□□ 0.21
TVP23B-206ENST00000574226 IMPACTQ9P2X3 320 aa16.37■□□□□ 0.21
TVP23B-206ENST00000574226 SAE1Q9UBE0 346 aaPredicted RBP16.37■□□□□ 0.21
TVP23B-206ENST00000574226 TMEM98Q9Y2Y6 226 aa16.37■□□□□ 0.21
TVP23B-206ENST00000574226 ZNF711Q9Y462 761 aa16.37■□□□□ 0.21
TVP23B-206ENST00000574226 LAMA5O15230 3695 aa16.37■□□□□ 0.21
TVP23B-206ENST00000574226 INPP4BO15327 924 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 PJA2O43164 708 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 PMPCBO75439 489 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 ECEL1O95672 775 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 PECAM1P16284 738 aaPredicted RBP16.36■□□□□ 0.21
TVP23B-206ENST00000574226 AK4P27144 223 aaPredicted RBP16.36■□□□□ 0.21
TVP23B-206ENST00000574226 VAV2P52735 878 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 ZFP36L1Q07352 338 aaKnown RBP16.36■□□□□ 0.21
TVP23B-206ENST00000574226 MPP3Q13368 585 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 PCSK7Q16549 785 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 RAB11FIP2Q7L804 512 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 PID1Q7Z2X4 250 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 CLEC14AQ86T13 490 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 PIM3Q86V86 326 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 ZC3H18Q86VM9 953 aaKnown RBP16.36■□□□□ 0.21
TVP23B-206ENST00000574226 TRAM1L1Q8N609 369 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 Q8N9G6 341 aaPredicted RBP16.36■□□□□ 0.21
TVP23B-206ENST00000574226 SPATA22Q8NHS9 363 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 DTX3LQ8TDB6 740 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 UBE2Q2Q8WVN8 375 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 HAUS1Q96CS2 278 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 PPP1R2P1Q96PQ5 205 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 QKIQ96PU8 341 aaKnown RBP eCLIP16.36■□□□□ 0.21
TVP23B-206ENST00000574226 PLEKHG4BQ96PX9 1271 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 FCRL5Q96RD9 977 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 WDR24Q96S15 920 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 CMKLR1Q99788 373 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 BAG1Q99933 345 aaPredicted RBP16.36■□□□□ 0.21
TVP23B-206ENST00000574226 SPATA16Q9BXB7 569 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 CARD9Q9H257 536 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 STN1Q9H668 368 aaKnown RBP16.36■□□□□ 0.21
TVP23B-206ENST00000574226 AKAP7Q9P0M2 348 aaPredicted RBP16.36■□□□□ 0.21
TVP23B-206ENST00000574226 ZNHIT2Q9UHR6 403 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 CNOT6Q9ULM6 557 aaKnown RBP16.36■□□□□ 0.21
TVP23B-206ENST00000574226 PCDHGA7Q9Y5G6 932 aa16.36■□□□□ 0.21
TVP23B-206ENST00000574226 LOC285095A0A1B0GVY8 99 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 CDRT15L2A8MXV6 281 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 GOLGA6L6A8MZA4 724 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 DNAJC6O75061 913 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 PPFIA2O75334 1257 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 STK10O94804 968 aaKnown RBP16.35■□□□□ 0.21
TVP23B-206ENST00000574226 SLC25A14O95258 325 aaPredicted RBP16.35■□□□□ 0.21
TVP23B-206ENST00000574226 MT-CYBP00156 380 aaPredicted RBP16.35■□□□□ 0.21
TVP23B-206ENST00000574226 HLA-DPA1P20036 260 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 CTNNA2P26232 953 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 HMGCLP35914 325 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 FASLGP48023 281 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 RWDD2BP57060 319 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 GPLD1P80108 840 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 B4GALNT1Q00973 533 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 TLE3Q04726 772 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 CCDC173Q0VFZ6 552 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 SQSTM1Q13501 440 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 ITPRIPL1Q6GPH6 555 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 MARK2Q7KZI7 788 aaKnown RBP16.35■□□□□ 0.21
TVP23B-206ENST00000574226 KDELC2Q7Z4H8 507 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 TRIM74Q86UV6 250 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 SYCE1Q8N0S2 351 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 NAGSQ8N159 534 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 FBXO39Q8N4B4 442 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 KCNE4Q8WWG9 221 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 SH3KBP1Q96B97 665 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 HERPUD2Q9BSE4 406 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 B3GNT4Q9C0J1 378 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 EPB41L5Q9HCM4 733 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 TRIM39Q9HCM9 518 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 SHOC2Q9UQ13 582 aa16.35■□□□□ 0.21
TVP23B-206ENST00000574226 OR5K4A6NMS3 321 aa16.34■□□□□ 0.21
TVP23B-206ENST00000574226 FADS2P1A8MWK0 482 aa16.34■□□□□ 0.21
TVP23B-206ENST00000574226 NUAK1O60285 661 aa16.34■□□□□ 0.21
TVP23B-206ENST00000574226 ANXA9O76027 345 aa16.34■□□□□ 0.21
TVP23B-206ENST00000574226 TJP3O95049 919 aa16.34■□□□□ 0.21
TVP23B-206ENST00000574226 TNFSF15O95150 251 aa16.34■□□□□ 0.21
TVP23B-206ENST00000574226 JMJD7P0C870 316 aa16.34■□□□□ 0.21
TVP23B-206ENST00000574226 NFKB1P19838 968 aa16.34■□□□□ 0.21
TVP23B-206ENST00000574226 ALDH4A1P30038 563 aa16.34■□□□□ 0.21
TVP23B-206ENST00000574226 CDC25BP30305 580 aa16.34■□□□□ 0.21
TVP23B-206ENST00000574226 CD68P34810 354 aaPredicted RBP16.34■□□□□ 0.21
TVP23B-206ENST00000574226 MARCKSL1P49006 195 aa16.34■□□□□ 0.21
TVP23B-206ENST00000574226 CLCNKAP51800 687 aa16.34■□□□□ 0.21
TVP23B-206ENST00000574226 MAZP56270 477 aaKnown RBP16.34■□□□□ 0.21
TVP23B-206ENST00000574226 WNT3AP56704 352 aa16.34■□□□□ 0.21
TVP23B-206ENST00000574226 ADCY2Q08462 1091 aa16.34■□□□□ 0.21
TVP23B-206ENST00000574226 KIF5AQ12840 1032 aa16.34■□□□□ 0.21
TVP23B-206ENST00000574226 TRA2AQ13595 282 aaKnown RBP eCLIP16.34■□□□□ 0.21
TVP23B-206ENST00000574226 NOMO1Q15155 1222 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms