RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 NCK1P16333 377 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 OGNP20774 298 aaKnown RBP10.71□□□□□ -0.7
CCDC40-207ENST00000572253 FOXA1P55317 472 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 SLC10A7Q0GE19 358 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 RBBP7Q16576 425 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 MOGQ16653 247 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 RABL3Q5HYI8 236 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 TAF2Q6P1X5 1199 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 ZNF773Q6PK81 442 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 PTRH1Q86Y79 214 aaKnown RBP10.71□□□□□ -0.7
CCDC40-207ENST00000572253 PNPLA1Q8N8W4 532 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 PDPRQ8NCN5 879 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 PEX13Q92968 403 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 FATE1Q969F0 183 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 CNDP2Q96KP4 475 aaKnown RBP10.71□□□□□ -0.7
CCDC40-207ENST00000572253 ZYG11BQ9C0D3 744 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 TAS2R13Q9NYV9 303 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 IFT80Q9P2H3 777 aaPredicted RBP10.71□□□□□ -0.7
CCDC40-207ENST00000572253 MAGEL2Q9UJ55 1249 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 NUDT5Q9UKK9 219 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 CLEC11AQ9Y240 323 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 V9GYQ6 96 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 H3BMM5 538 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 ACOX3O15254 700 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 EEDO75530 441 aaKnown RBP10.7□□□□□ -0.7
CCDC40-207ENST00000572253 FGF1P05230 155 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 HLA-DPA1P20036 260 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 VARSP26640 1264 aaKnown RBP10.7□□□□□ -0.7
CCDC40-207ENST00000572253 SOX11P35716 441 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 PHEXP78562 749 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 TRAF2Q12933 501 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 GRB14Q14449 540 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 OR4D1Q15615 310 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 OTUD3Q5T2D3 398 aaPredicted RBP10.7□□□□□ -0.7
CCDC40-207ENST00000572253 OVOS1Q6IE37 1185 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 SCN4BQ8IWT1 228 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 CLEC4FQ8N1N0 589 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 C3orf58Q8NDZ4 430 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 LPPQ93052 612 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 VPS33AQ96AX1 596 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 PLEKHA8Q96JA3 519 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 NSUN5Q96P11 429 aaKnown RBP10.7□□□□□ -0.7
CCDC40-207ENST00000572253 DOK1Q99704 481 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 AIG1Q9NVV5 245 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 OSER1Q9NX31 292 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 LRRC14BA6NHZ5 514 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 MEIS3P2A8K0S8 358 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 PPP6CO00743 305 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 MLYCDO95822 493 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 ARL1P40616 181 aaPredicted RBP10.7□□□□□ -0.7
CCDC40-207ENST00000572253 POLR2JP52435 117 aaKnown RBP10.7□□□□□ -0.7
CCDC40-207ENST00000572253 ADAM17P78536 824 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 ZNF235Q14590 738 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 PLCL1Q15111 1095 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 PAN2Q504Q3 1202 aaKnown RBP10.7□□□□□ -0.7
CCDC40-207ENST00000572253 CYBRD1Q53TN4 286 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 PHYKPLQ8IUZ5 450 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 KIAA1191Q96A73 305 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 C1orf74Q96LT6 269 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 CHID1Q9BWS9 393 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 MUC3BQ9H195 1237 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 PALMDQ9NP74 551 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 KCTD3Q9Y597 815 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 GPR45Q9Y5Y3 372 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 ARL5CA6NH57 179 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 J3KR12 359 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 TULP3O75386 442 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 ZBTB11O95625 1053 aaPredicted RBP10.7□□□□□ -0.7
CCDC40-207ENST00000572253 SNAP29O95721 258 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 UGT1A1P22309 533 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 UGT1A4P22310 534 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 HTR1EP28566 365 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 UGT1A3P35503 534 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 UGT1A5P35504 534 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 TMBIM6P55061 237 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 DIO3P55073 304 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 SPIDRQ14159 915 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 RCAN2Q14206 197 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 PAPD5Q8NDF8 572 aaKnown RBP10.7□□□□□ -0.7
CCDC40-207ENST00000572253 GPR150Q8NGU9 434 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 OR4L1Q8NH43 312 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 MTG1Q9BT17 334 aaPredicted RBP10.7□□□□□ -0.7
CCDC40-207ENST00000572253 AARSD1Q9BTE6 412 aaKnown RBP10.7□□□□□ -0.7
CCDC40-207ENST00000572253 ZFYVE28Q9HCC9 887 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 GMIPQ9P107 970 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 BLOC1S6Q9UL45 172 aa10.7□□□□□ -0.7
CCDC40-207ENST00000572253 CCDC162PA2VCL2 907 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 PFDN6O15212 129 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 ATP6V1G1O75348 118 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 NPPAP01160 153 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 CHRNB3Q05901 458 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 GRSF1Q12849 480 aaKnown RBP eCLIP10.69□□□□□ -0.7
CCDC40-207ENST00000572253 CBX3Q13185 183 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 TIGD2Q4W5G0 525 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 FAM98BQ52LJ0 330 aaKnown RBP10.69□□□□□ -0.7
CCDC40-207ENST00000572253 TXNDC11Q6PKC3 985 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 FAM43BQ6ZT52 329 aaPredicted RBP10.69□□□□□ -0.7
CCDC40-207ENST00000572253 ANKRD23Q86SG2 305 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 TMEM199Q8N511 208 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 OR56A4Q8NGH8 313 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms