RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 SLC2A6Q9UGQ3 507 aa6.94□□□□□ -1.3
SMG6-209ENST00000571442 APOBEC3BQ9UH17 382 aaKnown RBP6.94□□□□□ -1.3
SMG6-209ENST00000571442 SUFUQ9UMX1 484 aa6.94□□□□□ -1.3
SMG6-209ENST00000571442 SLC17A4Q9Y2C5 497 aa6.94□□□□□ -1.3
SMG6-209ENST00000571442 PRKAB1Q9Y478 270 aa6.94□□□□□ -1.3
SMG6-209ENST00000571442 PCDHGB2Q9Y5G2 931 aa6.94□□□□□ -1.3
SMG6-209ENST00000571442 SAR1BQ9Y6B6 198 aa6.94□□□□□ -1.3
SMG6-209ENST00000571442 ASXL3Q9C0F0 2248 aa6.94□□□□□ -1.3
SMG6-209ENST00000571442 RP1P56715 2156 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 CHD6Q8TD26 2715 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 GOLGA4Q13439 2230 aaKnown RBP6.93□□□□□ -1.3
SMG6-209ENST00000571442 PTPRBP23467 1997 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.93□□□□□ -1.3
SMG6-209ENST00000571442 PRSS38A1L453 326 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 OR51F1A6NGY5 319 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 CACNB4O00305 520 aaPredicted RBP6.93□□□□□ -1.3
SMG6-209ENST00000571442 FLRT2O43155 660 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 SIGLEC6O43699 453 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 KRT37O76014 449 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 RASGRP1O95267 797 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 EML2O95834 649 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 APRTP07741 180 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 ZNF8P17098 575 aaPredicted RBP6.93□□□□□ -1.3
SMG6-209ENST00000571442 NFKBIAP25963 317 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 IVDP26440 423 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 AK4P27144 223 aaPredicted RBP6.93□□□□□ -1.3
SMG6-209ENST00000571442 SPAM1P38567 509 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 GNPDA1P46926 289 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 ARRB1P49407 418 aaPredicted RBP6.93□□□□□ -1.3
SMG6-209ENST00000571442 CRADDP78560 199 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 BASP1P80723 227 aaKnown RBP6.93□□□□□ -1.3
SMG6-209ENST00000571442 PPARDQ03181 441 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 C2orf54Q08AI8 447 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 GPS1Q13098 491 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 SLC14A1Q13336 389 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 PTK2BQ14289 1009 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 TAF1AQ15573 450 aaPredicted RBP6.93□□□□□ -1.3
SMG6-209ENST00000571442 DEFB133Q30KQ1 61 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 PROX2Q3B8N5 592 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 PRRT3Q5FWE3 981 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 N4BP2L1Q5TBK1 243 aaPredicted RBP6.93□□□□□ -1.3
SMG6-209ENST00000571442 CCDC70Q6NSX1 233 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 XKR5Q6UX68 686 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 GSTA5Q7RTV2 222 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 ADGRG6Q86SQ4 1221 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 MARCH9Q86YJ5 346 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 KLHL7Q8IXQ5 586 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 MPP5Q8N3R9 675 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 OXR1Q8N573 874 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 TRAM1L1Q8N609 369 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 ATL2Q8NHH9 583 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 CCHCR1Q8TD31 782 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 BRSK1Q8TDC3 778 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 SETD7Q8WTS6 366 aaKnown RBP6.93□□□□□ -1.3
SMG6-209ENST00000571442 CPT1BQ92523 772 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 SCARF2Q96GP6 870 aaPredicted RBP6.93□□□□□ -1.3
SMG6-209ENST00000571442 HIC2Q96JB3 615 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 FERMT1Q9BQL6 677 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 TRIM51Q9BSJ1 452 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 SPATA16Q9BXB7 569 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 TRABDQ9H4I3 376 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 FAM96AQ9H5X1 160 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 CARS2Q9HA77 564 aaKnown RBP6.93□□□□□ -1.3
SMG6-209ENST00000571442 PHPT1Q9NRX4 125 aaPredicted RBP6.93□□□□□ -1.3
SMG6-209ENST00000571442 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.93□□□□□ -1.3
SMG6-209ENST00000571442 ATXN10Q9UBB4 475 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 MOSPD1Q9UJG1 213 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 ANGPTL2Q9UKU9 493 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 DGKBQ9Y6T7 804 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 BPTFQ12830 3046 aa6.93□□□□□ -1.3
SMG6-209ENST00000571442 GLYATL1P3A0A0U1RQE8 302 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 RGSL1A5PLK6 1076 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 MROH6A6NGR9 719 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 TOR1BO14657 336 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 TNFRSF10CO14798 259 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 TP73O15350 636 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 YY2O15391 372 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 STX7O15400 261 aaKnown RBP6.92□□□□□ -1.3
SMG6-209ENST00000571442 AQP9O43315 295 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 SGTAO43765 313 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 DFNA5O60443 496 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 AVILO75366 819 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 BANF1O75531 89 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 ZNF189O75820 626 aaPredicted RBP6.92□□□□□ -1.3
SMG6-209ENST00000571442 DKK1O94907 266 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 TNFP01375 233 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 IVLP07476 585 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 F7P08709 466 aaPredicted RBP6.92□□□□□ -1.3
SMG6-209ENST00000571442 LPOP22079 712 aaPredicted RBP6.92□□□□□ -1.3
SMG6-209ENST00000571442 PSMA3P25788 255 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 MSNP26038 577 aaKnown RBP6.92□□□□□ -1.3
SMG6-209ENST00000571442 MGAT1P26572 445 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 HTR1BP28222 390 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 CASQ1P31415 396 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 ADCY8P40145 1251 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 GRK6P43250 576 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 MAGEA6P43360 314 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 FNTAP49354 379 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 CTSCP53634 463 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 SESN2P58004 480 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms