RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 CCDC112Q8NEF3 446 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 OR10G6Q8NH81 332 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 EXD1Q8NHP7 514 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 ARRDC2Q8TBH0 407 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 WDR24Q96S15 920 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 BPIFA3Q9BQP9 254 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 TDRD1Q9BXT4 1180 aaKnown RBP8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 PCDH9Q9HC56 1237 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 TBC1D29Q9UFV1 150 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 CNOT6Q9ULM6 557 aaKnown RBP8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 PCDHGA3Q9Y5H0 932 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 BOD1L1Q8NFC6 3051 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 KCNK1O00180 336 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 TERTO14746 1132 aaKnown RBP8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 MATN3O15232 486 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 SUV39H1O43463 412 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 DUX1O43812 170 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 PPFIA2O75334 1257 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 JCHAINP01591 159 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 SERPING1P05155 500 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 CYP1A2P05177 515 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 PIRTP0C851 137 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 ZNF30P17039 623 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 CD86P42081 329 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 ARSEP51690 589 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 TAS2R40P59535 323 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 SLC10A2Q12908 348 aaPredicted RBP8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 PEX6Q13608 980 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 GALNT3Q14435 633 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 IQCB1Q15051 598 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 IFI16Q16666 785 aaKnown RBP8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 CLPPQ16740 277 aaPredicted RBP8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 QPCTQ16769 361 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 HADHQ16836 314 aaKnown RBP8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 SKIDA1Q1XH10 827 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 PLA2G4EQ3MJ16 856 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 ANKRD20A8PQ5CZ79 823 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 DCAF12Q5T6F0 453 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 ALS2CLQ60I27 953 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 ALKBH5Q6P6C2 394 aaKnown RBP8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 BORAQ6PGQ7 559 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 B4GALNT4Q76KP1 1039 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 ZNF765Q7L2R6 523 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 LUZP1Q86V48 1076 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 CCNYQ8ND76 341 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 ZNF564Q8TBZ8 553 aaPredicted RBP8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 MAML1Q92585 1016 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 COX14Q96I36 57 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 DDA1Q9BW61 102 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 TBC1D10AQ9BXI6 508 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 CEP41Q9BYV8 373 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 BRD8Q9H0E9 1235 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 SLC25A18Q9H1K4 315 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 FAM83DQ9H4H8 585 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 APMAPQ9HDC9 416 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 PRDM8Q9NQV8 689 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 GEMIN8Q9NWZ8 242 aaKnown RBP8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 DTLQ9NZJ0 730 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 CTTNBP2NLQ9P2B4 639 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 SHOC2Q9UQ13 582 aa8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 RP1L1Q8IWN7 2480 aaPredicted RBP8.53□□□□□ -1.04
CTDNEP1-203ENST00000570385 LOC101059948A0A1B0GTJ6 334 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 B4E171 279 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 MMP2P08253 660 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 SFTPCP11686 197 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 ZNF8P17098 575 aaPredicted RBP8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 TYRP1P17643 537 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 CCNCP24863 283 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 TSPAN7P41732 249 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 FASLGP48023 281 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 SPINT3P49223 89 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 POLE2P56282 527 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 GPLD1P80108 840 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 FANCCQ00597 558 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 TLE1Q04724 770 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 ZBTB17Q13105 803 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 SQSTM1Q13501 440 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 LRP8Q14114 963 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 PAFAH1B3Q15102 231 aaKnown RBP8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 HENMT1Q5T8I9 393 aaKnown RBP8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 ATP1A1-AS1Q5TC04 95 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 TIGD7Q6NT04 549 aaPredicted RBP8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 C16orf46Q6P387 395 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 IYDQ6PHW0 289 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 CRTC3Q6UUV7 619 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 XKR5Q6UX68 686 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 LYSMD3Q7Z3D4 306 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 TIPARPQ7Z3E1 657 aaKnown RBP8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 NLRP8Q86W28 1048 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 LRRC49Q8IUZ0 686 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 PQLC3Q8N755 202 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 BMPERQ8N8U9 685 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 FAM71BQ8TC56 605 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 RAPGEF5Q92565 580 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 RTP4Q96DX8 246 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 TSGA13Q96PP4 275 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 PACSIN1Q9BY11 444 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 ASPSCR1Q9BZE9 553 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 B3GNT4Q9C0J1 378 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms