RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 PSMB4P28070 264 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 GEMP55040 296 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 CTBSQ01459 385 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 CYP4F3Q08477 520 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 HLTFQ14527 1009 aaKnown RBP eCLIP12.93□□□□□ -0.34
CNOT1-220ENST00000569916 RTP5Q14D33 572 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 C14orf28Q4W4Y0 310 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 PYCR3Q53H96 274 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 ZNF569Q5MCW4 686 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 CERCAMQ5T4B2 595 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 SLC30A9Q6PML9 568 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 MARK2Q7KZI7 788 aaKnown RBP12.93□□□□□ -0.34
CNOT1-220ENST00000569916 TRAM1L1Q8N609 369 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 TTC13Q8NBP0 860 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 CCDC110Q8TBZ0 833 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 DEPDC7Q96QD5 511 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 FERMT1Q9BQL6 677 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 ZSCAN5AQ9BUG6 496 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 SPATA16Q9BXB7 569 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 FSD1LQ9BXM9 530 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 NRSN2Q9GZP1 204 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 DPEP2Q9H4A9 486 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 RAD18Q9NS91 495 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 R3HDM2Q9Y2K5 976 aaKnown RBP12.93□□□□□ -0.34
CNOT1-220ENST00000569916 PLEKHM1Q9Y4G2 1056 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 GPSM3Q9Y4H4 160 aa12.93□□□□□ -0.34
CNOT1-220ENST00000569916 NTN3O00634 580 aaPredicted RBP12.92□□□□□ -0.34
CNOT1-220ENST00000569916 TCEA3O75764 348 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 ANXA9O76027 345 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 STK10O94804 968 aaKnown RBP12.92□□□□□ -0.34
CNOT1-220ENST00000569916 ASMTLO95671 621 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 AGTP01019 485 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 PTMAP06454 111 aaKnown RBP12.92□□□□□ -0.34
CNOT1-220ENST00000569916 CCDC175P0C221 793 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 GLB1P16278 677 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 ADRA1AP35348 466 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 HMGCLP35914 325 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 ACTR1BP42025 376 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 TNNT3P45378 269 aaPredicted RBP12.92□□□□□ -0.34
CNOT1-220ENST00000569916 PDX1P52945 283 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 MAZP56270 477 aaKnown RBP12.92□□□□□ -0.34
CNOT1-220ENST00000569916 ACTR1AP61163 376 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 PDPK2PQ6A1A2 396 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 RBM44Q6ZP01 1051 aaKnown RBP12.92□□□□□ -0.34
CNOT1-220ENST00000569916 ZNF662Q6ZS27 426 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 C17orf82Q86X59 251 aaPredicted RBP12.92□□□□□ -0.34
CNOT1-220ENST00000569916 GALNT13Q8IUC8 556 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 OR6C4Q8NGE1 309 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 WDR48Q8TAF3 677 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 SLC35B2Q8TB61 432 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 ZDHHC1Q8WTX9 485 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 PLEKHG4BQ96PX9 1271 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 FICDQ9BVA6 458 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 TRABDQ9H4I3 376 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 BPIFA1Q9NP55 256 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 HACD3Q9P035 362 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 RNF215Q9Y6U7 377 aa12.92□□□□□ -0.34
CNOT1-220ENST00000569916 BPTFQ12830 3046 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 DMXL2Q8TDJ6 3036 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 A0A1W2PQM1 296 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 C5orf60A6NFR6 353 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 ZNF189O75820 626 aaPredicted RBP12.91□□□□□ -0.34
CNOT1-220ENST00000569916 KRT37O76014 449 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 PNLIPP16233 465 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 OLIG2Q13516 323 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 LRP8Q14114 963 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 ISXQ2M1V0 245 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 ZNF648Q5T619 568 aaPredicted RBP12.91□□□□□ -0.34
CNOT1-220ENST00000569916 SEL1L2Q5TEA6 688 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 MEI1Q5TIA1 1274 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 GLT6D1Q7Z4J2 308 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 KLHDC8BQ8IXV7 354 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 NAGSQ8N159 534 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 BLOC1S5Q8TDH9 187 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 PATE1Q8WXA2 126 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 GLYATL1Q969I3 302 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 SYNDIG1Q9H7V2 258 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 RMI1Q9H9A7 625 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 ARFGAP3Q9NP61 516 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 LZTFL1Q9NQ48 299 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 IL17CQ9P0M4 197 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 LRIT1Q9P2V4 623 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 ATXN10Q9UBB4 475 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 APPL1Q9UKG1 709 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 TMPRSS11EQ9UL52 423 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 PRKAB1Q9Y478 270 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 ENTPD2Q9Y5L3 495 aa12.91□□□□□ -0.34
CNOT1-220ENST00000569916 ZZEF1O43149 2961 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 CACNA1BQ00975 2339 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 NUDT21O43809 227 aaKnown RBP12.9□□□□□ -0.34
CNOT1-220ENST00000569916 NUAK1O60285 661 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 USP12O75317 370 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 SLC25A14O95258 325 aaPredicted RBP12.9□□□□□ -0.34
CNOT1-220ENST00000569916 ECEL1O95672 775 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 RPLP0P05388 317 aaKnown RBP12.9□□□□□ -0.34
CNOT1-220ENST00000569916 ZNF8P17098 575 aaPredicted RBP12.9□□□□□ -0.34
CNOT1-220ENST00000569916 GDF10P55107 478 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 CCL7P80098 99 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 PEX6Q13608 980 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 SPIDRQ14159 915 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms