RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 A0A1W2PQC6 194 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 PCDHGA12O60330 932 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 DKK1O94907 266 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 ANXA6P08133 673 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 GLI1P08151 1106 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 KRT16P08779 473 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 SELLP14151 372 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 PBX2P40425 430 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 BUD31P41223 144 aaPredicted RBP6.65□□□□□ -1.35
SMG1-217ENST00000569764 SERPINB8P50452 374 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 FKBP3Q00688 224 aaKnown RBP6.65□□□□□ -1.35
SMG1-217ENST00000569764 TWF1Q12792 350 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 MAP4K2Q12851 820 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 CHAF1BQ13112 559 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 TAF1BQ53T94 588 aaPredicted RBP6.65□□□□□ -1.35
SMG1-217ENST00000569764 PIK3R6Q5UE93 754 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 METTL2BQ6P1Q9 378 aaKnown RBP6.65□□□□□ -1.35
SMG1-217ENST00000569764 PTCHD4Q6ZW05 846 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 SZRD1Q7Z422 152 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 GRASPQ7Z6J2 395 aaPredicted RBP6.65□□□□□ -1.35
SMG1-217ENST00000569764 TRIM59Q8IWR1 403 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 GALNT15Q8N3T1 639 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 SIMC1Q8NDZ2 872 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 SPATA4Q8NEY3 305 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 SUSD3Q96L08 255 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 MS4A5Q9H3V2 200 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 BRD7Q9NPI1 651 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 DDX43Q9NXZ2 648 aaKnown RBP6.65□□□□□ -1.35
SMG1-217ENST00000569764 EURLQ9NYK6 297 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 MYO1AQ9UBC5 1043 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 NAALADL1Q9UQQ1 740 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 PCDHGA9Q9Y5G4 932 aaKnown RBP6.65□□□□□ -1.35
SMG1-217ENST00000569764 PCDHGA7Q9Y5G6 932 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 PCDHGA6Q9Y5G7 932 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 ARL5CA6NH57 179 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 TMEM189-UBE2V1I3L0A0 370 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 RPP40O75818 363 aaKnown RBP6.64□□□□□ -1.35
SMG1-217ENST00000569764 GGT5P36269 586 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 SKP1P63208 163 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 DCTN2Q13561 401 aaKnown RBP6.64□□□□□ -1.35
SMG1-217ENST00000569764 EIF4HQ15056 248 aaKnown RBP6.64□□□□□ -1.35
SMG1-217ENST00000569764 HFEQ30201 348 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 EFHC1Q5JVL4 640 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 LSMEM2Q8N112 164 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 MAB21L3Q8N8X9 362 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 SP7Q8TDD2 431 aaPredicted RBP6.64□□□□□ -1.35
SMG1-217ENST00000569764 KAT2BQ92831 832 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 HAUS1Q96CS2 278 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 STRA6Q9BX79 667 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 COQ10BQ9H8M1 238 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 PARVAQ9NVD7 372 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 PAQR5Q9NXK6 330 aaPredicted RBP6.64□□□□□ -1.35
SMG1-217ENST00000569764 STX18Q9P2W9 335 aaKnown RBP6.64□□□□□ -1.35
SMG1-217ENST00000569764 TBX20Q9UMR3 447 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.64□□□□□ -1.35
SMG1-217ENST00000569764 OR5K4A6NMS3 321 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 F5H5T6 163 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 H7C1Q1 480 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 CSTAP01040 98 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 GJA1P17302 382 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 IFNA8P32881 189 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 MAGEA4P43358 317 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 UCNP55089 124 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 E2F1Q01094 437 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 CREB5Q02930 508 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 C2orf54Q08AI8 447 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 KRT33BQ14525 404 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 SLC39A12Q504Y0 691 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 MPPE1Q53F39 396 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 C8orf74Q6P047 294 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 C12orf56Q8IXR9 622 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 TMEM35BQ8NCS4 154 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 PLEKHO2Q8TD55 490 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 SETD7Q8WTS6 366 aaKnown RBP6.64□□□□□ -1.35
SMG1-217ENST00000569764 KCNE4Q8WWG9 221 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 PIGKQ92643 395 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 TMA16Q96EY4 203 aaKnown RBP6.64□□□□□ -1.35
SMG1-217ENST00000569764 BTBD6Q96KE9 485 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 PINK1Q9BXM7 581 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 TRIM54Q9BYV2 358 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 TMEM9BQ9NQ34 198 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 ATXN10Q9UBB4 475 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 FNDC3AQ9Y2H6 1198 aaKnown RBP6.64□□□□□ -1.35
SMG1-217ENST00000569764 YBX2Q9Y2T7 364 aaKnown RBP6.64□□□□□ -1.35
SMG1-217ENST00000569764 INSL5Q9Y5Q6 135 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 GMEB1Q9Y692 573 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 BTBD17A6NE02 478 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 LRRC53A6NM62 1247 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 H0YIV9 168 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 SOCS6O14544 535 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 VEGFDO43915 354 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 CDC123O75794 336 aaPredicted RBP6.64□□□□□ -1.35
SMG1-217ENST00000569764 NDUFA10O95299 355 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 CAPN1P07384 714 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 IDO1P14902 403 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 GTF2H1P32780 548 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 ARL4AP40617 200 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 GNG11P61952 73 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 DLG4P78352 724 aa6.64□□□□□ -1.35
SMG1-217ENST00000569764 PDE1BQ01064 536 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms