RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 NPHS1O60500 1241 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 FAM163BP0C2L3 166 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 BMP2P12643 396 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 IDO1P14902 403 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 ICAM3P32942 547 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 GRK3P35626 688 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 POLR2JP52435 117 aaKnown RBP10.86□□□□□ -0.67
PALB2-206ENST00000568219 TMBIM6P55061 237 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 WNT3AP56704 352 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 DDX39BQ13838 428 aaKnown RBP10.86□□□□□ -0.67
PALB2-206ENST00000568219 TTLL4Q14679 1199 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 MAPKAPK3Q16644 382 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 DDR2Q16832 855 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 KIAA0408Q6ZU52 694 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 NEK10Q6ZWH5 1172 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 MIB1Q86YT6 1006 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 SCML4Q8N228 414 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 ANKFN1Q8N957 763 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 CHPT1Q8WUD6 406 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 KCNS3Q9BQ31 491 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 DPY30Q9C005 99 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 PIGVQ9NUD9 493 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 TMEM9Q9P0T7 183 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 CNOT11Q9UKZ1 510 aaKnown RBP10.86□□□□□ -0.67
PALB2-206ENST00000568219 CARD8Q9Y2G2 431 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 WBP11Q9Y2W2 641 aaKnown RBP10.86□□□□□ -0.67
PALB2-206ENST00000568219 IRS2Q9Y4H2 1338 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 PCP4L1A6NKN8 68 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 SLC22A2O15244 555 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 GSRP00390 522 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 HLA-DPA1P20036 260 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 SOX6P35712 828 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 EPS8Q12929 822 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 KCNAB2Q13303 367 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 ARMCX4Q5H9R4 360 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 CELF3Q5SZQ8 465 aaKnown RBP10.85□□□□□ -0.67
PALB2-206ENST00000568219 UGT3A1Q6NUS8 523 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 HFE2Q6ZVN8 426 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 LGI2Q8N0V4 545 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 PRDM8Q9NQV8 689 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 BOLA1Q9Y3E2 137 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 PNMA8CA0A1B0GUJ8 204 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 MOXD2PA6NHM9 499 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 EFCAB9A8MZ26 197 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 AIREO43918 545 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 SEC22BO75396 215 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 ALDH1A2O94788 518 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 IL12RB1P42701 662 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 APLP1P51693 650 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 CLDN10P78369 228 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 RAD51Q06609 339 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 LRRC74AQ0VAA2 488 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 RFTN1Q14699 578 aaPredicted RBP10.85□□□□□ -0.67
PALB2-206ENST00000568219 SMU1Q2TAY7 513 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 ATAD3BQ5T9A4 648 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 PRR23CQ6ZRP0 262 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 ANKRD13BQ86YJ7 626 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 PACRGLQ8N7B6 248 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 FLAD1Q8NFF5 587 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 SNX27Q96L92 541 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 TBATAQ96M53 351 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 IRF2BPLQ9H1B7 796 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 MYOZ2Q9NPC6 264 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 CACNG4Q9UBN1 327 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 KLHL20Q9Y2M5 609 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 STYXL1Q9Y6J8 313 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 SMCHD1A6NHR9 2005 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 PRRC2BQ5JSZ5 2229 aaKnown RBP10.85□□□□□ -0.67
PALB2-206ENST00000568219 ILVBLA1L0T0 632 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 EVPLLA8MZ36 301 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 RGS20O76081 388 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 CPSF4O95639 269 aaKnown RBP10.85□□□□□ -0.67
PALB2-206ENST00000568219 SLC2A3P11169 496 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 WSCD1Q658N2 575 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 ITIH5Q86UX2 942 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 TTC30BQ8N4P2 665 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 REPS2Q8NFH8 660 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 SLC47A1Q96FL8 570 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 APOL4Q9BPW4 351 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 SEZ6LQ9BYH1 1024 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 ZNF408Q9H9D4 720 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 PLAC1Q9HBJ0 212 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 INTS7Q9NVH2 962 aaKnown RBP10.85□□□□□ -0.67
PALB2-206ENST00000568219 C14orf119Q9NWQ9 140 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 ERVK-11Q9UQG0 969 aa10.85□□□□□ -0.67
PALB2-206ENST00000568219 MAFBQ9Y5Q3 323 aaPredicted RBP10.85□□□□□ -0.67
PALB2-206ENST00000568219 ZCWPW2A0A1B0GU75 182 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 EFCAB10A6NFE3 127 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 CYBBP04839 570 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 CAPN3P20807 821 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 CYP3A5P20815 502 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 AQP1P29972 269 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 IDUAP35475 653 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 GRIK1P39086 918 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 SERPINH1P50454 418 aaKnown RBP10.84□□□□□ -0.67
PALB2-206ENST00000568219 RPL38P63173 70 aaKnown RBP10.84□□□□□ -0.67
PALB2-206ENST00000568219 LRP8Q14114 963 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 C6orf141Q5SZD1 244 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.84□□□□□ -0.67
PALB2-206ENST00000568219 MARC1Q5VT66 337 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms