RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	BBS5	Q8N3I7	341 aa		11.28	□□□□□ -0.6
TCF4-238	ENST00000568169	NEK11	Q8NG66	645 aa		11.28	□□□□□ -0.6
TCF4-238	ENST00000568169	EXD1	Q8NHP7	514 aa		11.28	□□□□□ -0.6
TCF4-238	ENST00000568169	ENOX1	Q8TC92	643 aa	Known RBP	11.28	□□□□□ -0.6
TCF4-238	ENST00000568169	SMIM14	Q96QK8	99 aa		11.28	□□□□□ -0.6
TCF4-238	ENST00000568169	AGAP2	Q99490	1192 aa		11.28	□□□□□ -0.6
TCF4-238	ENST00000568169	HERPUD2	Q9BSE4	406 aa		11.28	□□□□□ -0.6
TCF4-238	ENST00000568169	STN1	Q9H668	368 aa	Known RBP	11.28	□□□□□ -0.6
TCF4-238	ENST00000568169	PRDM8	Q9NQV8	689 aa		11.28	□□□□□ -0.6
TCF4-238	ENST00000568169	PARVA	Q9NVD7	372 aa		11.28	□□□□□ -0.6
TCF4-238	ENST00000568169	TAS2R14	Q9NYV8	317 aa		11.28	□□□□□ -0.6
TCF4-238	ENST00000568169	VPS18	Q9P253	973 aa		11.28	□□□□□ -0.6
TCF4-238	ENST00000568169	PLEKHB1	Q9UF11	243 aa	Predicted RBP	11.28	□□□□□ -0.6
TCF4-238	ENST00000568169	ZNHIT2	Q9UHR6	403 aa		11.28	□□□□□ -0.6
TCF4-238	ENST00000568169	POLH	Q9Y253	713 aa		11.28	□□□□□ -0.6
TCF4-238	ENST00000568169	PCDHB3	Q9Y5E6	796 aa		11.28	□□□□□ -0.6
TCF4-238	ENST00000568169	MN1	Q10571	1320 aa	Predicted RBP	11.28	□□□□□ -0.6
TCF4-238	ENST00000568169	UTP20	O75691	2785 aa	Known RBP	11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	KIR2DS5	A0A0G2JLQ3	304 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169		A0A0G2JNG1	304 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	TMEM191C	A6NGB0	347 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	LILRA5	A6NI73	299 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	KIR2DS3	K7RE56	304 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	INPP4B	O15327	924 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	PRPSAP2	O60256	369 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	FZD6	O60353	706 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	RNF8	O76064	485 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	ASMTL	O95671	621 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	C9	P02748	559 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	TPM2	P07951	284 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	FURIN	P09958	794 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	F3	P13726	295 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	ZNF28	P17035	718 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	ZNF30	P17039	623 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	AMPD1	P23109	780 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	DLST	P36957	453 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	MMP13	P45452	471 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	NOP2	P46087	812 aa	Known RBP	11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	STC1	P52823	247 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	KIR2DS5	Q14953	304 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	ASB18	Q6ZVZ8	466 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	CHST15	Q7LFX5	561 aa	Predicted RBP	11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	SLC9B2	Q86UD5	537 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	PLXDC1	Q8IUK5	500 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	NDUFAF2	Q8N183	169 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	SYT11	Q9BT88	431 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	RIOK2	Q9BVS4	552 aa	Known RBP	11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	ULBP3	Q9BZM4	244 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	TRIM7	Q9C029	511 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	ETNK2	Q9NVF9	386 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	CNOT8	Q9UFF9	292 aa	Known RBP	11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	KLHL3	Q9UH77	587 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	TLK1	Q9UKI8	766 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	CNOT6	Q9ULM6	557 aa	Known RBP	11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	PRKAB1	Q9Y478	270 aa		11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	OAS3	Q9Y6K5	1087 aa	Known RBP	11.27	□□□□□ -0.61
TCF4-238	ENST00000568169	MDC1	Q14676	2089 aa	Known RBP	11.26	□□□□□ -0.61
TCF4-238	ENST00000568169		A0A0J9YYE9	177 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	OR5K4	A6NMS3	321 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169		H3BRJ5	948 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	LRCH4	O75427	683 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	RFPL1	O75677	317 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	RECK	O95980	971 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	TRBC1	P01850	177 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	ATP1A1	P05023	1023 aa	Known RBP	11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	ATP1A3	P13637	1013 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	SLC2A4	P14672	509 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	FER	P16591	822 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	MAPK9	P45984	424 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	UQCRFS1	P47985	274 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	PMS2	P54278	862 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	CDH6	P55285	790 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	FOXM1	Q08050	763 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	ERV3-1	Q14264	604 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	MARC1	Q5VT66	337 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	PPP1R2P3	Q6NXS1	205 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	TMCO3	Q6UWJ1	677 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	C6orf15	Q6UXA7	325 aa	Predicted RBP	11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	LYSMD3	Q7Z3D4	306 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	RAVER1	Q8IY67	606 aa	Known RBP	11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	AVL9	Q8NBF6	648 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	GALNT6	Q8NCL4	622 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	GALNT11	Q8NCW6	608 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	C9orf72	Q96LT7	481 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	ERGIC2	Q96RQ1	377 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	WDR24	Q96S15	920 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	TBC1D10A	Q9BXI6	508 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	ZWILCH	Q9H900	591 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	RMI1	Q9H9A7	625 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	UCK1	Q9HA47	277 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	OGFR	Q9NZT2	677 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	CPNE7	Q9UBL6	633 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	CROT	Q9UKG9	612 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	KCNK6	Q9Y257	313 aa		11.26	□□□□□ -0.61
TCF4-238	ENST00000568169	ITPR2	Q14571	2701 aa		11.25	□□□□□ -0.61
TCF4-238	ENST00000568169	GOLGA6L3	A6NEY3	463 aa		11.25	□□□□□ -0.61
TCF4-238	ENST00000568169	LGALS16	A8MUM7	142 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms