RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 ZFYVE1Q9HBF4 777 aa6.87□□□□□ -1.31
SF3B3-209ENST00000567635 THSD1Q9NS62 852 aa6.87□□□□□ -1.31
SF3B3-209ENST00000567635 RAD18Q9NS91 495 aa6.87□□□□□ -1.31
SF3B3-209ENST00000567635 VPS18Q9P253 973 aa6.87□□□□□ -1.31
SF3B3-209ENST00000567635 BOLA1Q9Y3E2 137 aa6.87□□□□□ -1.31
SF3B3-209ENST00000567635 PLEKHM1Q9Y4G2 1056 aa6.87□□□□□ -1.31
SF3B3-209ENST00000567635 PCDHGA8Q9Y5G5 932 aa6.87□□□□□ -1.31
SF3B3-209ENST00000567635 PCDHA3Q9Y5H8 950 aa6.87□□□□□ -1.31
SF3B3-209ENST00000567635 RNF215Q9Y6U7 377 aa6.87□□□□□ -1.31
SF3B3-209ENST00000567635 DUSP10Q9Y6W6 482 aa6.87□□□□□ -1.31
SF3B3-209ENST00000567635 BPTFQ12830 3046 aa6.87□□□□□ -1.31
SF3B3-209ENST00000567635 ITPR1Q14643 2758 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 LOC285095A0A1B0GVY8 99 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 CCDC66A2RUB6 948 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 RCCD1A6NED2 376 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 BTNL10A8MVZ5 291 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 D6RAR5 112 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 H7C0C1 242 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 B4GAT1O43505 415 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 TNFSF15O95150 251 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 SLC25A14O95258 325 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-209ENST00000567635 MT-CYBP00156 380 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-209ENST00000567635 ATP1A1P05023 1023 aaKnown RBP6.86□□□□□ -1.31
SF3B3-209ENST00000567635 PIRTP0C851 137 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 ALDH4A1P30038 563 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 CD68P34810 354 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-209ENST00000567635 CETN2P41208 172 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 ACTR1BP42025 376 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 MLLT3P42568 568 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-209ENST00000567635 TNNT3P45378 269 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-209ENST00000567635 GPR3P46089 330 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 ATP5OP48047 213 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 MARCKSL1P49006 195 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 INHBCP55103 352 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 MAZP56270 477 aaKnown RBP6.86□□□□□ -1.31
SF3B3-209ENST00000567635 PCBP4P57723 403 aaKnown RBP6.86□□□□□ -1.31
SF3B3-209ENST00000567635 OR1D5P58170 312 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 ACTR1AP61163 376 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 B4GALNT1Q00973 533 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 ZFP36L1Q07352 338 aaKnown RBP6.86□□□□□ -1.31
SF3B3-209ENST00000567635 ADCY2Q08462 1091 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 WASHC5Q12768 1159 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 XRCC4Q13426 336 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 BIRC2Q13490 618 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 LRP8Q14114 963 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 PPP2R5EQ16537 467 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 FOXR1Q6PIV2 292 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 BBS12Q6ZW61 710 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 USP53Q70EK8 1073 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 RAB11FIP2Q7L804 512 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 SPRED1Q7Z699 444 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 B3GNT8Q7Z7M8 397 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 PIM3Q86V86 326 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 GALNT13Q8IUC8 556 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 FBXO39Q8N4B4 442 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 GPR26Q8NDV2 337 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 ZNF248Q8NDW4 579 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 KRT35Q92764 455 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 EID2BQ96D98 161 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 VAT1Q99536 393 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 BAG1Q99933 345 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-209ENST00000567635 SPATA16Q9BXB7 569 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 DPH1Q9BZG8 443 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 FOXP3Q9BZS1 431 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 LACRTQ9GZZ8 138 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 EPB41L5Q9HCM4 733 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 TRIM39Q9HCM9 518 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 ASCL3Q9NQ33 180 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 UBP1Q9NZI7 540 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 FAM153AQ9UHL3 310 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 TRHDEQ9UKU6 1024 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 ATXN7L1Q9ULK2 861 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-209ENST00000567635 SHOC2Q9UQ13 582 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 EFR3BQ9Y2G0 817 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 ST14Q9Y5Y6 855 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 OAS3Q9Y6K5 1087 aaKnown RBP6.86□□□□□ -1.31
SF3B3-209ENST00000567635 COL6A6A6NMZ7 2263 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 SDK2Q58EX2 2172 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 SPTBP11277 2137 aa6.86□□□□□ -1.31
SF3B3-209ENST00000567635 ASPMQ8IZT6 3477 aa6.85□□□□□ -1.31
SF3B3-209ENST00000567635 TRBV23OR9-2A0A075B6M9 112 aa6.85□□□□□ -1.31
SF3B3-209ENST00000567635 PMS2P1A4D2B8 440 aa6.85□□□□□ -1.31
SF3B3-209ENST00000567635 FADS2P1A8MWK0 482 aa6.85□□□□□ -1.31
SF3B3-209ENST00000567635 CDRT15L2A8MXV6 281 aa6.85□□□□□ -1.31
SF3B3-209ENST00000567635 APOC4-APOC2K7ER74 178 aa6.85□□□□□ -1.31
SF3B3-209ENST00000567635 PLD2O14939 933 aa6.85□□□□□ -1.31
SF3B3-209ENST00000567635 PPM1DO15297 605 aa6.85□□□□□ -1.31
SF3B3-209ENST00000567635 PJA2O43164 708 aa6.85□□□□□ -1.31
SF3B3-209ENST00000567635 GRID2O43424 1007 aa6.85□□□□□ -1.31
SF3B3-209ENST00000567635 NUAK1O60285 661 aa6.85□□□□□ -1.31
SF3B3-209ENST00000567635 DNAJC6O75061 913 aa6.85□□□□□ -1.31
SF3B3-209ENST00000567635 CPNE6O95741 557 aa6.85□□□□□ -1.31
SF3B3-209ENST00000567635 APOC2P02655 101 aa6.85□□□□□ -1.31
SF3B3-209ENST00000567635 BPIP17213 487 aa6.85□□□□□ -1.31
SF3B3-209ENST00000567635 NFKB1P19838 968 aa6.85□□□□□ -1.31
SF3B3-209ENST00000567635 CD1CP29017 333 aa6.85□□□□□ -1.31
SF3B3-209ENST00000567635 CCKBRP32239 447 aa6.85□□□□□ -1.31
SF3B3-209ENST00000567635 CTNNA1P35221 906 aaKnown RBP6.85□□□□□ -1.31
SF3B3-209ENST00000567635 UGT1A5P35504 534 aa6.85□□□□□ -1.31
SF3B3-209ENST00000567635 WNT3AP56704 352 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms