RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 KHKP50053 298 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 COPB1P53618 953 aaKnown RBP3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 ADPRHP54922 357 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 SH3BGRP55822 239 aaPredicted RBP3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 TAS2R40P59535 323 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 TRA2BP62995 288 aaKnown RBP3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 PSG6Q00889 435 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 MAPK11Q15759 364 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 INAQ16352 499 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 TBC1D25Q3MII6 688 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 CEP55Q53EZ4 464 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 USP39Q53GS9 565 aaKnown RBP3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 TAF1BQ53T94 588 aaPredicted RBP3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 RABL3Q5HYI8 236 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 TMEM268Q5VZI3 342 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 DENND2CQ68D51 928 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 PLA2G4FQ68DD2 849 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 DHRS7BQ6IAN0 325 aaPredicted RBP3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 DPY19L2P1Q6NXN4 242 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 CASC4Q6P4E1 433 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 DHRS13Q6UX07 377 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 TMEM182Q6ZP80 229 aaPredicted RBP3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 INTS8Q75QN2 995 aaKnown RBP3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 LDB1Q86U70 411 aaPredicted RBP3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 NOXA1Q86UR1 476 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 DTX2Q86UW9 622 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 KLBQ86Z14 1044 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 CAMK1DQ8IU85 385 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 UNC5CLQ8IV45 518 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 SERPINA12Q8IW75 414 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 LAS2Q8IYD9 372 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 RNF168Q8IYW5 571 aaPredicted RBP3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 MAML2Q8IZL2 1156 aaPredicted RBP3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 Q8N1X5 172 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 D2HGDHQ8N465 521 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 GMCL1P1Q8NEA9 526 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 MDGA1Q8NFP4 955 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 MYCBPAPQ8TBZ2 947 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 CAGE1Q8TC20 777 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 HEXDCQ8WVB3 486 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 LPIN2Q92539 896 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 DNASE1L2Q92874 299 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 EXT2Q93063 718 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 MIB2Q96AX9 1013 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 RSPRY1Q96DX4 576 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 C5orf30Q96GV9 206 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 LCORQ96JN0 433 aaPredicted RBP3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 DDOQ99489 341 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 ALOXE3Q9BYJ1 711 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 NYXQ9GZU5 481 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 SPATC1LQ9H0A9 340 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 PIGMQ9H3S5 423 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 FZD8Q9H461 694 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 MINDY3Q9H8M7 445 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 AKIRIN1Q9H9L7 192 aaPredicted RBP3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 NGBQ9NPG2 151 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 PIH1D3Q9NQM4 214 aaKnown RBP3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 DNAJC11Q9NVH1 559 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 INTS13Q9NVM9 706 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 TMOD2Q9NZR1 351 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 C11orf21Q9P2W6 132 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 HECAQ9UBI9 543 aaPredicted RBP3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 DKK3Q9UBP4 350 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 ST6GALNAC2Q9UJ37 374 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 AMFRQ9UKV5 643 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 MTUS1Q9ULD2 1270 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 TEX264Q9Y6I9 313 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 ZNF644Q9H582 1327 aaPredicted RBP3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 KDM6BO15054 1643 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 C5orf51A6NDU8 294 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 CXorf65A6NEN9 183 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 SLC9B1P1A6NJY1 282 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 HSPB2A8KAH6 182 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 YDJCA8MPS7 323 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 CAPN14A8MX76 684 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 AP3B1O00203 1094 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 CACNB4O00305 520 aaPredicted RBP3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 RASGRF2O14827 1237 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 GMFGO60234 142 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 HSF2BPO75031 334 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 NME6O75414 186 aaPredicted RBP3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 DAB1O75553 588 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 PALMO75781 387 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 PDGFBP01127 241 aaPredicted RBP3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 ENO1P06733 434 aaKnown RBP3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 CHRM2P08172 466 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 CD63P08962 238 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 HOXB5P09067 269 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 RFPL3SP0C7P2 107 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 KRT5P13647 590 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 GNAZP19086 355 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 CYP11B2P19099 503 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 TGM2P21980 687 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 IL4RP24394 825 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 CD27P26842 260 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 EPHB2P29323 1055 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 CASQ1P31415 396 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 WNT5AP41221 380 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 MAGEA4P43358 317 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms