RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 ICAM1P05362 532 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 HSP90AA1P07900 732 aaKnown RBP4.45□□□□□ -1.7
CHD9-215ENST00000565442 HOXC6P09630 235 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 T-ENOLP0DO92 83 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 SELLP14151 372 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 UBA1P22314 1058 aaKnown RBP4.45□□□□□ -1.7
CHD9-215ENST00000565442 ACADLP28330 430 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 HOXA13P31271 388 aaPredicted RBP4.45□□□□□ -1.7
CHD9-215ENST00000565442 HOXC9P31274 260 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 NRIP1P48552 1158 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 CSNK2A1P68400 391 aaPredicted RBP4.45□□□□□ -1.7
CHD9-215ENST00000565442 IFI35P80217 286 aaPredicted RBP4.45□□□□□ -1.7
CHD9-215ENST00000565442 BNC1Q01954 994 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 DSC1Q08554 894 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 TRAF3Q13114 568 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 DHX34Q14147 1143 aaKnown RBP4.45□□□□□ -1.7
CHD9-215ENST00000565442 BECN1Q14457 450 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 CTF1Q16619 201 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 ZNF805Q5CZA5 627 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 FAM69BQ5VUD6 431 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 LINC00346Q8IVM7 164 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 ADHFE1Q8IWW8 467 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 OR8H2Q8N162 312 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 CSNK2A3Q8NEV1 391 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 OR2AK2Q8NG84 335 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 HMGCLL1Q8TB92 370 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 HM13Q8TCT9 377 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 EGLN2Q96KS0 407 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 HRH4Q9H3N8 390 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 PLSCR4Q9NRQ2 329 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 PAG1Q9NWQ8 432 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 NRBP1Q9UHY1 535 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 FBXW11Q9UKB1 542 aa4.45□□□□□ -1.7
CHD9-215ENST00000565442 CPED1A4D0V7 1026 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 TIMM44O43615 452 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 KCNJ13O60928 360 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 DAB1O75553 588 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 ERAL1O75616 437 aaKnown RBP4.44□□□□□ -1.7
CHD9-215ENST00000565442 HIST1H2ABP04908 130 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 ACTN1P12814 892 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 HIST1H2ADP20671 130 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 SAT1P21673 171 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 KRT20P35900 424 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 NNMTP40261 264 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 SUOXP51687 545 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 HNRNPH2P55795 449 aaKnown RBP4.44□□□□□ -1.7
CHD9-215ENST00000565442 MRPS5P82675 430 aaKnown RBP4.44□□□□□ -1.7
CHD9-215ENST00000565442 FOXM1Q08050 763 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 GRSF1Q12849 480 aaKnown RBP eCLIP4.44□□□□□ -1.7
CHD9-215ENST00000565442 PLCB4Q15147 1175 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 XKR9Q5GH70 373 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 ZNF280DQ6N043 979 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 C8orf82Q6P1X6 216 aaPredicted RBP4.44□□□□□ -1.7
CHD9-215ENST00000565442 KCTD18Q6PI47 426 aaPredicted RBP4.44□□□□□ -1.7
CHD9-215ENST00000565442 TMCO3Q6UWJ1 677 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 HIST3H2AQ7L7L0 130 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 TSPAN33Q86UF1 283 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 AACSQ86V21 672 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 HACE1Q8IYU2 909 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 SCYL3Q8IZE3 742 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 BEST3Q8N1M1 668 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 SCML4Q8N228 414 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 PGBD5Q8N414 524 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 IL17RCQ8NAC3 791 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 OR1J2Q8NGS2 313 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 MIB2Q96AX9 1013 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 SLC22A18Q96BI1 424 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 RHBDF1Q96CC6 855 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 CMKLR1Q99788 373 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 SPRY4Q9C004 299 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 EPB41L5Q9HCM4 733 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 OCIAD1Q9NX40 245 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 SEC63Q9UGP8 760 aaKnown RBP4.44□□□□□ -1.7
CHD9-215ENST00000565442 CHORDC1Q9UHD1 332 aaPredicted RBP4.44□□□□□ -1.7
CHD9-215ENST00000565442 POLG2Q9UHN1 485 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 PCDHA7Q9UN72 937 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 TTLL3Q9Y4R7 772 aa4.44□□□□□ -1.7
CHD9-215ENST00000565442 IGLV5-52A0A0A0MRZ9 124 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 A0A0U1RQJ8 604 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 OR2A25A4D2G3 310 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 EIF4E1BA6NMX2 242 aaKnown RBP4.43□□□□□ -1.7
CHD9-215ENST00000565442 P4HA2O15460 535 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 SPINT2O43291 252 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 MITFO75030 526 aaPredicted RBP4.43□□□□□ -1.7
CHD9-215ENST00000565442 GLUD1P00367 558 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 PRSS2P07478 247 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 MSH2P43246 934 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 GLUD2P49448 558 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 GPR143P51810 404 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 RRP1P56182 461 aaKnown RBP4.43□□□□□ -1.7
CHD9-215ENST00000565442 DLG2Q15700 870 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 BMP2KLQ5H9B9 411 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 EFHC1Q5JVL4 640 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 DCST1Q5T197 706 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 NSUN5P2Q63ZY6 315 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 RGMBQ6NW40 437 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 KBTBD6Q86V97 674 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 DCP1BQ8IZD4 617 aaKnown RBP4.43□□□□□ -1.7
CHD9-215ENST00000565442 FBXL14Q8N1E6 418 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 TMTC2Q8N394 836 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms