RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 LRRC4Q9HBW1 653 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 TMEM30AQ9NV96 361 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 FAM118AQ9NWS6 357 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 KIAA1456Q9P272 454 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 PEMTQ9UBM1 199 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 RCOR1Q9UKL0 485 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 STON1Q9Y6Q2 735 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 AFF2P51816 1311 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 EIF3AQ14152 1382 aaKnown RBP4.18□□□□□ -1.74
CHD9-212ENST00000564641 NHSL1Q5SYE7 1610 aa4.18□□□□□ -1.74
CHD9-212ENST00000564641 WDHD1O75717 1129 aaPredicted RBP4.18□□□□□ -1.74
CHD9-212ENST00000564641 POU1F1P28069 291 aa4.18□□□□□ -1.74
CHD9-212ENST00000564641 GNL1P36915 607 aaPredicted RBP4.18□□□□□ -1.74
CHD9-212ENST00000564641 HOXA1P49639 335 aaPredicted RBP4.18□□□□□ -1.74
CHD9-212ENST00000564641 BIRC3Q13489 604 aa4.18□□□□□ -1.74
CHD9-212ENST00000564641 FCN2Q15485 313 aa4.18□□□□□ -1.74
CHD9-212ENST00000564641 HIST2H2ACQ16777 129 aaPredicted RBP4.18□□□□□ -1.74
CHD9-212ENST00000564641 WDR45BQ5MNZ6 344 aa4.18□□□□□ -1.74
CHD9-212ENST00000564641 CCDC70Q6NSX1 233 aa4.18□□□□□ -1.74
CHD9-212ENST00000564641 METTL2BQ6P1Q9 378 aaKnown RBP4.18□□□□□ -1.74
CHD9-212ENST00000564641 LDHAL6AQ6ZMR3 332 aa4.18□□□□□ -1.74
CHD9-212ENST00000564641 MTSS1LQ765P7 747 aa4.18□□□□□ -1.74
CHD9-212ENST00000564641 GPAT4Q86UL3 456 aa4.18□□□□□ -1.74
CHD9-212ENST00000564641 WDR63Q8IWG1 891 aa4.18□□□□□ -1.74
CHD9-212ENST00000564641 ZCCHC9Q8N567 271 aaKnown RBP4.18□□□□□ -1.74
CHD9-212ENST00000564641 LSM14AQ8ND56 463 aaKnown RBP4.18□□□□□ -1.74
CHD9-212ENST00000564641 METTL2AQ96IZ6 378 aaKnown RBP4.18□□□□□ -1.74
CHD9-212ENST00000564641 TBATAQ96M53 351 aa4.18□□□□□ -1.74
CHD9-212ENST00000564641 EYA3Q99504 573 aa4.18□□□□□ -1.74
CHD9-212ENST00000564641 REEP2Q9BRK0 252 aa4.18□□□□□ -1.74
CHD9-212ENST00000564641 C1QTNF5Q9BXJ0 243 aa4.18□□□□□ -1.74
CHD9-212ENST00000564641 MKKSQ9NPJ1 570 aaPredicted RBP4.18□□□□□ -1.74
CHD9-212ENST00000564641 SNTG1Q9NSN8 517 aa4.18□□□□□ -1.74
CHD9-212ENST00000564641 TAAR2Q9P1P5 351 aa4.18□□□□□ -1.74
CHD9-212ENST00000564641 GJD2Q9UKL4 321 aa4.18□□□□□ -1.74
CHD9-212ENST00000564641 CCDC144AA2RUR9 1427 aa4.18□□□□□ -1.74
CHD9-212ENST00000564641 SNED1Q8TER0 1413 aa4.18□□□□□ -1.74
CHD9-212ENST00000564641 RRBP1Q9P2E9 1410 aaKnown RBP4.18□□□□□ -1.74
CHD9-212ENST00000564641 XRN1Q8IZH2 1706 aaKnown RBP4.18□□□□□ -1.74
CHD9-212ENST00000564641 A0A0U1RQG5 324 aaPredicted RBP4.17□□□□□ -1.74
CHD9-212ENST00000564641 TEX22C9J3V5 150 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 CCER2I3L3R5 266 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 MT-CYBP00156 380 aaPredicted RBP4.17□□□□□ -1.74
CHD9-212ENST00000564641 AMBPP02760 352 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 HSP90AA1P07900 732 aaKnown RBP4.17□□□□□ -1.74
CHD9-212ENST00000564641 IRF1P10914 325 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 HLA-DOBP13765 273 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 HSD17B4P51659 736 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 KRTAP10-12P60413 245 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 MAPRE1Q15691 268 aaKnown RBP4.17□□□□□ -1.74
CHD9-212ENST00000564641 MMEL1Q495T6 779 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 PDSS1Q5T2R2 415 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 RGMBQ6NW40 437 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 KCTD18Q6PI47 426 aaPredicted RBP4.17□□□□□ -1.74
CHD9-212ENST00000564641 GFRALQ6UXV0 394 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 SLC36A4Q6YBV0 504 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 TMEM219Q86XT9 240 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 CNBD1Q8NA66 436 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 TEX19Q8NA77 164 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 GCC1Q96CN9 775 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 PYM1Q9BRP8 204 aaKnown RBP4.17□□□□□ -1.74
CHD9-212ENST00000564641 MAGEE1Q9HCI5 957 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 SCRT2Q9NQ03 307 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 BEX4Q9NWD9 120 aaPredicted RBP4.17□□□□□ -1.74
CHD9-212ENST00000564641 TINAGQ9UJW2 476 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 FAM96BQ9Y3D0 163 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 PSAT1Q9Y617 370 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 PRAG1Q86YV5 1406 aa4.17□□□□□ -1.74
CHD9-212ENST00000564641 PDS5AQ29RF7 1337 aaKnown RBP4.17□□□□□ -1.74
CHD9-212ENST00000564641 PNPLA6Q8IY17 1366 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 ANTXRLA6NF34 631 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 HEXAP06865 529 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 MAOAP21397 527 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 S1PR1P21453 382 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 GAGE5Q13069 117 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 GAGE6Q13070 117 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 PPFIA1Q13136 1202 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 TMEM30BQ3MIR4 351 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 MAP3K21Q5TCX8 1036 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 PCGF5Q86SE9 256 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 EPHX4Q8IUS5 362 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 ODF3L1Q8IXM7 274 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 C1orf87Q8N0U7 546 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 CIARTQ8N365 385 aaPredicted RBP4.16□□□□□ -1.74
CHD9-212ENST00000564641 IL17REQ8NFR9 667 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 FAM76AQ8TAV0 307 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 RND1Q92730 232 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 ABTB1Q969K4 478 aaPredicted RBP4.16□□□□□ -1.74
CHD9-212ENST00000564641 BBS4Q96RK4 519 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 NUF2Q9BZD4 464 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 ESRP2Q9H6T0 727 aaKnown RBP4.16□□□□□ -1.74
CHD9-212ENST00000564641 ZNF696Q9H7X3 374 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 BPIFA1Q9NP55 256 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 HCN3Q9P1Z3 774 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 RALYQ9UKM9 306 aaKnown RBP4.16□□□□□ -1.74
CHD9-212ENST00000564641 PADI1Q9ULC6 663 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 C1orf167Q5SNV9 1468 aa4.16□□□□□ -1.74
CHD9-212ENST00000564641 ARHGEF10O15013 1369 aa4.15□□□□□ -1.74
CHD9-212ENST00000564641 CDC42BPGQ6DT37 1551 aa4.15□□□□□ -1.74
CHD9-212ENST00000564641 LRP6O75581 1613 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms