RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 SH3KBP1Q96B97 665 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 IMP4Q96G21 291 aaKnown RBP14.89□□□□□ -0.03
SPG7-210ENST00000564409 SEMA6CQ9H3T2 930 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 STN1Q9H668 368 aaKnown RBP14.89□□□□□ -0.03
SPG7-210ENST00000564409 RDH14Q9HBH5 336 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 MAGEE1Q9HCI5 957 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 NFKBIL1Q9UBC1 381 aaPredicted RBP14.89□□□□□ -0.03
SPG7-210ENST00000564409 IGHV1OR21-1A0A087WYE8 117 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 IGHV5-10-1A0A0J9YXX1 117 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 C3orf70A6NLC5 250 aaPredicted RBP14.88□□□□□ -0.03
SPG7-210ENST00000564409 OR5K4A6NMS3 321 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 PPM1DO15297 605 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 DNAJC6O75061 913 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 MFAP3LO75121 409 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 PRB1P04280 392 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 DCDC1P59894 354 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 AP1B1Q10567 949 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 CCDC70Q6NSX1 233 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 USP53Q70EK8 1073 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 TMPRSS9Q7Z410 1059 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 RHOT1Q8IXI2 618 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 ZNF843Q8N446 348 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 AGBL5Q8NDL9 886 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 USP7Q93009 1102 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 OLFM3Q96PB7 478 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 AGAP2Q99490 1192 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 HERPUD2Q9BSE4 406 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 ZSCAN5AQ9BUG6 496 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 SLC25A51Q9H1U9 297 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 CARD9Q9H257 536 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 EPB41L1Q9H4G0 881 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 ZFYVE1Q9HBF4 777 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 KCNK4Q9NYG8 393 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 ZNHIT2Q9UHR6 403 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 CNOT6Q9ULM6 557 aaKnown RBP14.88□□□□□ -0.03
SPG7-210ENST00000564409 PCDHGA3Q9Y5H0 932 aa14.88□□□□□ -0.03
SPG7-210ENST00000564409 PRAMEF33A0A0G2JMD5 474 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 A0A0U1RQS6 177 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 INPP4BO15327 924 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 MTSS1O43312 755 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 PRAMEF10O60809 474 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 ITIH1P19827 911 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 CLCNKAP51800 687 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 TFDP2Q14188 446 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 C16orf72Q14CZ0 275 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 TMEM71Q6P5X7 295 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 ZNF574Q6ZN55 896 aaPredicted RBP14.87□□□□□ -0.03
SPG7-210ENST00000564409 MARK2Q7KZI7 788 aaKnown RBP14.87□□□□□ -0.03
SPG7-210ENST00000564409 LYSMD3Q7Z3D4 306 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 ZNF605Q86T29 641 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 TRIM74Q86UV6 250 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 DTX1Q86Y01 620 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 ZSCAN1Q8NBB4 408 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 OR10G6Q8NH81 332 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 PATE1Q8WXA2 126 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 TADA1Q96BN2 335 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 SGF29Q96ES7 293 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 SMIM14Q96QK8 99 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 TAAR9Q96RI9 348 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 TRIB3Q96RU7 358 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 WDR24Q96S15 920 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 CHP1Q99653 195 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 NUDT22Q9BRQ3 303 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.87□□□□□ -0.03
SPG7-210ENST00000564409 TSPY26PQ9H489 355 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 SARS2Q9NP81 518 aaKnown RBP14.87□□□□□ -0.03
SPG7-210ENST00000564409 PDP2Q9P2J9 529 aa14.87□□□□□ -0.03
SPG7-210ENST00000564409 KIR2DS5A0A0G2JLQ3 304 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 A0A0G2JNG1 304 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 KIR2DS3K7RE56 304 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 DUX1O43812 170 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 KRT1P04264 644 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 ITGB2P05107 769 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 CSTF2P33240 577 aaKnown RBP eCLIP14.86□□□□□ -0.03
SPG7-210ENST00000564409 MAPK10P53779 464 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 EPHA4P54764 986 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 HADHBP55084 474 aaKnown RBP14.86□□□□□ -0.03
SPG7-210ENST00000564409 CDK18Q07002 472 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 ZBTB17Q13105 803 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 KIR2DS5Q14953 304 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 TEX44Q53QW1 395 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 MANEAQ5SRI9 462 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.86□□□□□ -0.03
SPG7-210ENST00000564409 IYDQ6PHW0 289 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 WDR74Q6RFH5 385 aaPredicted RBP14.86□□□□□ -0.03
SPG7-210ENST00000564409 RFX6Q8HWS3 928 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 SLC37A2Q8TED4 501 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 MED8Q96G25 268 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 AHCYL2Q96HN2 611 aaKnown RBP14.86□□□□□ -0.03
SPG7-210ENST00000564409 CCDC74BQ96LY2 380 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 AGAP3Q96P47 875 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 SLC38A3Q99624 504 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 DDA1Q9BW61 102 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 ASPSCR1Q9BZE9 553 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 TRIM39Q9HCM9 518 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 SPTLC3Q9NUV7 552 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 PLEKHM1Q9Y4G2 1056 aa14.86□□□□□ -0.03
SPG7-210ENST00000564409 SDK2Q58EX2 2172 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 KALRNO60229 2985 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 FADS2P1A8MWK0 482 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms