RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 GALNT15Q8N3T1 639 aa20.12■□□□□ 0.81
CMTM3-206ENST00000563672 ARL10Q8N8L6 244 aa20.12■□□□□ 0.81
CMTM3-206ENST00000563672 IL26Q9NPH9 171 aa20.12■□□□□ 0.81
CMTM3-206ENST00000563672 TRMT1Q9NXH9 659 aaKnown RBP20.12■□□□□ 0.81
CMTM3-206ENST00000563672 FEZ2Q9UHY8 353 aaPredicted RBP20.12■□□□□ 0.81
CMTM3-206ENST00000563672 DRG1Q9Y295 367 aaKnown RBP20.12■□□□□ 0.81
CMTM3-206ENST00000563672 ST14Q9Y5Y6 855 aa20.12■□□□□ 0.81
CMTM3-206ENST00000563672 AKAP13Q12802 2813 aa20.11■□□□□ 0.81
CMTM3-206ENST00000563672 PSMD3O43242 534 aa20.11■□□□□ 0.81
CMTM3-206ENST00000563672 DNAJC6O75061 913 aa20.11■□□□□ 0.81
CMTM3-206ENST00000563672 PPFIA2O75334 1257 aa20.11■□□□□ 0.81
CMTM3-206ENST00000563672 ASMTLO95671 621 aa20.11■□□□□ 0.81
CMTM3-206ENST00000563672 ADCY8P40145 1251 aa20.11■□□□□ 0.81
CMTM3-206ENST00000563672 ILF3Q12906 894 aaKnown RBP eCLIP20.11■□□□□ 0.81
CMTM3-206ENST00000563672 TAF1AQ15573 450 aaPredicted RBP20.11■□□□□ 0.81
CMTM3-206ENST00000563672 GUSBP11Q6P575 273 aa20.11■□□□□ 0.81
CMTM3-206ENST00000563672 SLC35F6Q8N357 371 aa20.11■□□□□ 0.81
CMTM3-206ENST00000563672 FAM46DQ8NEK8 389 aa20.11■□□□□ 0.81
CMTM3-206ENST00000563672 GPR156Q8NFN8 814 aa20.11■□□□□ 0.81
CMTM3-206ENST00000563672 IFI44Q8TCB0 444 aa20.11■□□□□ 0.81
CMTM3-206ENST00000563672 BRSK1Q8TDC3 778 aa20.11■□□□□ 0.81
CMTM3-206ENST00000563672 GLYATL1Q969I3 302 aa20.11■□□□□ 0.81
CMTM3-206ENST00000563672 OR2M4Q96R27 311 aa20.11■□□□□ 0.81
CMTM3-206ENST00000563672 TMEM121BQ9BXQ6 578 aaPredicted RBP20.11■□□□□ 0.81
CMTM3-206ENST00000563672 GSDMCQ9BYG8 508 aa20.11■□□□□ 0.81
CMTM3-206ENST00000563672 SUDS3Q9H7L9 328 aaPredicted RBP20.11■□□□□ 0.81
CMTM3-206ENST00000563672 LRRC40Q9H9A6 602 aa20.11■□□□□ 0.81
CMTM3-206ENST00000563672 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.11■□□□□ 0.814e-6■■□□□ 12.2
CMTM3-206ENST00000563672 TMPRSS11EQ9UL52 423 aa20.11■□□□□ 0.81
CMTM3-206ENST00000563672 PADI4Q9UM07 663 aa20.11■□□□□ 0.81
CMTM3-206ENST00000563672 CPED1A4D0V7 1026 aa20.1■□□□□ 0.81
CMTM3-206ENST00000563672 BUD23O43709 281 aaKnown RBP20.1■□□□□ 0.81
CMTM3-206ENST00000563672 AP2A1O95782 977 aa20.1■□□□□ 0.81
CMTM3-206ENST00000563672 IFNB1P01574 187 aa20.1■□□□□ 0.81
CMTM3-206ENST00000563672 INSM1Q01101 510 aaPredicted RBP20.1■□□□□ 0.81
CMTM3-206ENST00000563672 CTBSQ01459 385 aa20.1■□□□□ 0.81
CMTM3-206ENST00000563672 LONRF2Q1L5Z9 754 aa20.1■□□□□ 0.81
CMTM3-206ENST00000563672 MARK2Q7KZI7 788 aaKnown RBP20.1■□□□□ 0.81
CMTM3-206ENST00000563672 EFL1Q7Z2Z2 1120 aaKnown RBP20.1■□□□□ 0.81
CMTM3-206ENST00000563672 RASGEF1CQ8N431 466 aa20.1■□□□□ 0.81
CMTM3-206ENST00000563672 PDCD7Q8N8D1 485 aaKnown RBP20.1■□□□□ 0.81
CMTM3-206ENST00000563672 KYQ8NBH2 561 aa20.1■□□□□ 0.81
CMTM3-206ENST00000563672 GATA6Q92908 595 aa20.1■□□□□ 0.81
CMTM3-206ENST00000563672 LRRC45Q96CN5 670 aa20.1■□□□□ 0.81
CMTM3-206ENST00000563672 PBKQ96KB5 322 aa20.1■□□□□ 0.81
CMTM3-206ENST00000563672 VPS35Q96QK1 796 aa20.1■□□□□ 0.81
CMTM3-206ENST00000563672 RMI1Q9H9A7 625 aa20.1■□□□□ 0.81
CMTM3-206ENST00000563672 TRIM39Q9HCM9 518 aa20.1■□□□□ 0.81
CMTM3-206ENST00000563672 SPATS2LQ9NUQ6 558 aaKnown RBP20.1■□□□□ 0.81
CMTM3-206ENST00000563672 GULP1Q9UBP9 304 aa20.1■□□□□ 0.81
CMTM3-206ENST00000563672 PLEKHM1Q9Y4G2 1056 aa20.1■□□□□ 0.81
CMTM3-206ENST00000563672 GPSM3Q9Y4H4 160 aa20.1■□□□□ 0.81
CMTM3-206ENST00000563672 PCYT1BQ9Y5K3 369 aaPredicted RBP20.1■□□□□ 0.81
CMTM3-206ENST00000563672 ARL5AQ9Y689 179 aa20.1■□□□□ 0.81
CMTM3-206ENST00000563672 KNTC1P50748 2209 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 C2orf81A6NN90 581 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 GAPDHSO14556 408 aaPredicted RBP20.09■□□□□ 0.81
CMTM3-206ENST00000563672 STX7O15400 261 aaKnown RBP20.09■□□□□ 0.81
CMTM3-206ENST00000563672 KIF5CO60282 957 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 OPA1O60313 960 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 NOBOXO60393 691 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 SLC25A14O95258 325 aaPredicted RBP20.09■□□□□ 0.81
CMTM3-206ENST00000563672 LPOP22079 712 aaPredicted RBP20.09■□□□□ 0.81
CMTM3-206ENST00000563672 AK4P27144 223 aaPredicted RBP20.09■□□□□ 0.81
CMTM3-206ENST00000563672 FDFT1P37268 417 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 SPAM1P38567 509 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 CLDN6P56747 220 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 PTPRCAPQ14761 206 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 ATP13A5Q4VNC0 1218 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 ADGRG6Q86SQ4 1221 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 PRUNE1Q86TP1 453 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 GALNT13Q8IUC8 556 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 CACTIN-AS1Q8N1I8 211 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 TAB3Q8N5C8 712 aaPredicted RBP20.09■□□□□ 0.81
CMTM3-206ENST00000563672 PRELID2Q8N945 189 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 GLIS1Q8NBF1 620 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 ETNK1Q9HBU6 452 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 HOMER3Q9NSC5 361 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 TAAR2Q9P1P5 351 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 SIRPGQ9P1W8 387 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 ATXN10Q9UBB4 475 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 PKP3Q9Y446 797 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 KCTD3Q9Y597 815 aa20.09■□□□□ 0.81
CMTM3-206ENST00000563672 ERI2A8K979 691 aaKnown RBP20.08■□□□□ 0.81
CMTM3-206ENST00000563672 NUAK1O60285 661 aa20.08■□□□□ 0.81
CMTM3-206ENST00000563672 ETS1P14921 441 aa20.08■□□□□ 0.81
CMTM3-206ENST00000563672 LRP8Q14114 963 aa20.08■□□□□ 0.81
CMTM3-206ENST00000563672 CHRNA6Q15825 494 aa20.08■□□□□ 0.81
CMTM3-206ENST00000563672 PERM1Q5SV97 790 aa20.08■□□□□ 0.81
CMTM3-206ENST00000563672 ZNF648Q5T619 568 aaPredicted RBP20.08■□□□□ 0.81
CMTM3-206ENST00000563672 HES3Q5TGS1 186 aa20.08■□□□□ 0.81
CMTM3-206ENST00000563672 C17orf82Q86X59 251 aaPredicted RBP20.08■□□□□ 0.81
CMTM3-206ENST00000563672 MARCH9Q86YJ5 346 aa20.08■□□□□ 0.81
CMTM3-206ENST00000563672 PHYKPLQ8IUZ5 450 aa20.08■□□□□ 0.81
CMTM3-206ENST00000563672 SFTPA2Q8IWL1 248 aa20.08■□□□□ 0.81
CMTM3-206ENST00000563672 NAT6Q93015 286 aa20.08■□□□□ 0.81
CMTM3-206ENST00000563672 CNTNAP3BQ96NU0 1288 aa20.08■□□□□ 0.81
CMTM3-206ENST00000563672 C19orf43Q9BQ61 176 aa20.08■□□□□ 0.81
CMTM3-206ENST00000563672 CNTNAP3Q9BZ76 1288 aa20.08■□□□□ 0.81
CMTM3-206ENST00000563672 DPEP2Q9H4A9 486 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms