RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ATP11AP98196 1134 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 DPTQ07507 201 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 PNOCQ13519 176 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 LRP8Q14114 963 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 C15orf59Q2T9L4 293 aaPredicted RBP7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 C2CD6Q53TS8 623 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 MIIPQ5JXC2 388 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 CFAP58Q5T655 872 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 PWWP2BQ6NUJ5 590 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 TTI2Q6NXR4 508 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 DOK6Q6PKX4 331 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 RFLNAQ6ZTI6 216 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 PACS2Q86VP3 889 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 KCNMB4Q86W47 210 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 CCDC185Q8N715 623 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 TSEN2Q8NCE0 465 aaKnown RBP7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 FNIP1Q8TF40 1166 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 UBE2Q2Q8WVN8 375 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 KLHL6Q8WZ60 621 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 RNF166Q96A37 237 aaPredicted RBP7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 C18orf8Q96DM3 657 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 COX14Q96I36 57 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 TRIM8Q9BZR9 551 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 LRRC19Q9H756 370 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 SYNCQ9H7C4 482 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 ATP13A3Q9H7F0 1226 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 C5AR2Q9P296 337 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 CFAP45Q9UL16 551 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 FARSAQ9Y285 508 aaKnown RBP7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 TMEM98Q9Y2Y6 226 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 SLC30A1Q9Y6M5 507 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 CACNA1CQ13936 2221 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 ZNF185O15231 689 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 HTRA2O43464 458 aaPredicted RBP7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 KIF1CO43896 1103 aaKnown RBP7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 PRAMEF11O60813 436 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 PNMA6AP0CW24 399 aaPredicted RBP7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 SLC9A1P19634 815 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 VIPR1P32241 457 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 USP8P40818 1118 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 PPM1FP49593 454 aaPredicted RBP7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 HDAC4P56524 1084 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 PER3P56645 1201 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 UBE2IP63279 158 aaKnown RBP7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 CDK18Q07002 472 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 PKP1Q13835 747 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 ELOAQ14241 798 aaKnown RBP7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 PTPRRQ15256 657 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 PARP15Q460N3 678 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 CCDC40Q4G0X9 1142 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 RAET1GQ6H3X3 334 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 TRIM65Q6PJ69 517 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 IGFL3Q6UXB1 125 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 Q6ZVL8 140 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 PRSS42Q7Z5A4 293 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 TECPR1Q7Z6L1 1165 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 TRIM74Q86UV6 250 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 PPP1R3BQ86XI6 285 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 ZNF354CQ86Y25 554 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 ZNF295-AS1Q8N0V1 137 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 MMP21Q8N119 569 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 UMODL1-AS1Q8N2C9 162 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 PYROXD2Q8N2H3 581 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 EMC1Q8N766 993 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 CENPIQ92674 756 aaPredicted RBP7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 SH3KBP1Q96B97 665 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 RUBCNLQ9H714 662 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 UCK1Q9HA47 277 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 KCTD5Q9NXV2 234 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 GPR83Q9NYM4 423 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 SEMA5BQ9P283 1151 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 CPNE7Q9UBL6 633 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 B3GNT3Q9Y2A9 372 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 COPG1Q9Y678 874 aaKnown RBP7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 SEC16AO15027 2179 aa7.63□□□□□ -1.19
HERPUD1-206ENST00000563343 KIR2DS5A0A0G2JLQ3 304 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 A0A0G2JNG1 304 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 A0A0U1RQS6 177 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 FAM170AA1A519 330 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 NPIPB15A6NHN6 443 aaPredicted RBP7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 A6NL46 340 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 GOLGA8SH3BPF8 625 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 KIR2DS3K7RE56 304 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 PSMD11O00231 422 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 ZNF202O95125 648 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 STSP08842 583 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 F3P13726 295 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 TYRP1P17643 537 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 NELFEP18615 380 aaKnown RBP7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 KRT9P35527 623 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 KRTAP10-9P60411 292 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 RPS15P62841 145 aaKnown RBP7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 POLR2LP62875 67 aaKnown RBP7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 BCL2L1Q07817 233 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 GPS2Q13227 327 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 ART3Q13508 389 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 KIR2DS5Q14953 304 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 CDO1Q16878 200 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 CCDC14Q49A88 953 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms