RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 NFKBIL1Q9UBC1 381 aaPredicted RBP15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 GPR34Q9UPC5 381 aa15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 AAR2Q9Y312 384 aaKnown RBP15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 PLEKHM1Q9Y4G2 1056 aa15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 EME2A4GXA9 379 aaPredicted RBP15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 CASC3O15234 703 aaKnown RBP15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 ZNF189O75820 626 aaPredicted RBP15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 ASMTLO95671 621 aa15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 AK4P27144 223 aaPredicted RBP15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 CXCR5P32302 372 aa15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 HMGCLP35914 325 aa15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 DUSP3P51452 185 aaPredicted RBP15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 INSM1Q01101 510 aaPredicted RBP15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 SNX1Q13596 522 aa15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 ZNF569Q5MCW4 686 aa15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 PERM1Q5SV97 790 aa15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 ZNF648Q5T619 568 aaPredicted RBP15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 HES3Q5TGS1 186 aa15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 DENND5AQ6IQ26 1287 aa15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 LVRNQ6Q4G3 990 aa15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 CCNI2Q6ZMN8 369 aaPredicted RBP15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 EFL1Q7Z2Z2 1120 aaKnown RBP15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 GLT6D1Q7Z4J2 308 aa15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 PRUNE1Q86TP1 453 aa15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 SDR16C5Q8N3Y7 309 aa15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 TRAM1L1Q8N609 369 aa15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 GPBAR1Q8TDU6 330 aa15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 RTP4Q96DX8 246 aa15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 TBL1YQ9BQ87 522 aa15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 TRABDQ9H4I3 376 aa15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 IL17CQ9P0M4 197 aa15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 GULP1Q9UBP9 304 aa15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 PKD1L2Q7Z442 2459 aa15.26■□□□□ 0.03
CCNDBP1-203ENST00000562553 ANKRD11Q6UB99 2663 aaPredicted RBP15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 B4DGG1 531 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 DNAJC6O75061 913 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 FGGP02679 453 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 ADCY8P40145 1251 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 CTBSQ01459 385 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 MSLNQ13421 630 aaPredicted RBP15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 PTPRCAPQ14761 206 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 PARP6Q2NL67 630 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 PYCR3Q53H96 274 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 KCTD11Q693B1 232 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 GALNT15Q8N3T1 639 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 ARL10Q8N8L6 244 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 FAM46DQ8NEK8 389 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 SCG3Q8WXD2 468 aaKnown RBP15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 GLMNQ92990 594 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 OR2M4Q96R27 311 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 ZSCAN5AQ9BUG6 496 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 FRMD8P1Q9BZ68 369 aaPredicted RBP15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 CDH19Q9H159 772 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 RAD18Q9NS91 495 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 SPATS2LQ9NUQ6 558 aaKnown RBP15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 EVA1BQ9NVM1 165 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 TRNAU1APQ9NX07 287 aaKnown RBP15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 TRMT1Q9NXH9 659 aaKnown RBP15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 HACD3Q9P035 362 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 TMPRSS11EQ9UL52 423 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 PRKAB1Q9Y478 270 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 GPSM3Q9Y4H4 160 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 ARL5AQ9Y689 179 aa15.25■□□□□ 0.03
CCNDBP1-203ENST00000562553 GPR39O43194 453 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 CEP104O60308 925 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 OPA1O60313 960 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 NOBOXO60393 691 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 GP1BAP07359 652 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 CDK4P11802 303 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 ETS1P14921 441 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 CA5AP35218 305 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 ILF3Q12906 894 aaKnown RBP eCLIP15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 P3H1Q32P28 736 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 SLC30A9Q6PML9 568 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 TMPRSS12Q86WS5 348 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 SLC35F6Q8N357 371 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 GLIS1Q8NBF1 620 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 GPR156Q8NFN8 814 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 ANP32BQ92688 251 aaKnown RBP15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 GLYATL1Q969I3 302 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 PLEKHG4BQ96PX9 1271 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 GSDMCQ9BYG8 508 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 IL26Q9NPH9 171 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 NCKIPSDQ9NZQ3 722 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 TAAR2Q9P1P5 351 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 VPS18Q9P253 973 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 ATXN10Q9UBB4 475 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 RABGEF1Q9UJ41 708 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 PADI4Q9UM07 663 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 ZNF148Q9UQR1 794 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 KCTD3Q9Y597 815 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 UNC13CQ8NB66 2214 aa15.24■□□□□ 0.03
CCNDBP1-203ENST00000562553 NBEAQ8NFP9 2946 aa15.23■□□□□ 0.03
CCNDBP1-203ENST00000562553 TAF4O00268 1085 aa15.23■□□□□ 0.03
CCNDBP1-203ENST00000562553 GAPDHSO14556 408 aaPredicted RBP15.23■□□□□ 0.03
CCNDBP1-203ENST00000562553 MTX2O75431 263 aa15.23■□□□□ 0.03
CCNDBP1-203ENST00000562553 SLC25A14O95258 325 aaPredicted RBP15.23■□□□□ 0.03
CCNDBP1-203ENST00000562553 IFNB1P01574 187 aa15.23■□□□□ 0.03
CCNDBP1-203ENST00000562553 JUPP14923 745 aa15.23■□□□□ 0.03
CCNDBP1-203ENST00000562553 SPAM1P38567 509 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms