RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 ALS2CLQ60I27 953 aa16.3■□□□□ 0.2
PKD1-226ENST00000562425 KCTD11Q693B1 232 aa16.3■□□□□ 0.2
PKD1-226ENST00000562425 TTC30BQ8N4P2 665 aa16.3■□□□□ 0.2
PKD1-226ENST00000562425 PDCD7Q8N8D1 485 aaKnown RBP16.3■□□□□ 0.2
PKD1-226ENST00000562425 FAM181AQ8N9Y4 354 aa16.3■□□□□ 0.2
PKD1-226ENST00000562425 DTX3LQ8TDB6 740 aa16.3■□□□□ 0.2
PKD1-226ENST00000562425 BRSK1Q8TDC3 778 aa16.3■□□□□ 0.2
PKD1-226ENST00000562425 PDXPQ96GD0 296 aa16.3■□□□□ 0.2
PKD1-226ENST00000562425 OSBPL9Q96SU4 736 aa16.3■□□□□ 0.2
PKD1-226ENST00000562425 CARS2Q9HA77 564 aaKnown RBP16.3■□□□□ 0.2
PKD1-226ENST00000562425 MRPL40Q9NQ50 206 aaKnown RBP16.3■□□□□ 0.2
PKD1-226ENST00000562425 IL17CQ9P0M4 197 aa16.3■□□□□ 0.2
PKD1-226ENST00000562425 SNX12Q9UMY4 172 aa16.3■□□□□ 0.2
PKD1-226ENST00000562425 PCDHGA1Q9Y5H4 931 aa16.3■□□□□ 0.2
PKD1-226ENST00000562425 INPP4BO15327 924 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 YY2O15391 372 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 USP12O75317 370 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 IVLP07476 585 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 GIMD1P0DJR0 217 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 TCP1P17987 556 aaKnown RBP16.29■□□□□ 0.2
PKD1-226ENST00000562425 RPIAP49247 311 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 ILKQ13418 452 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 PEX6Q13608 980 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 SPARCL1Q14515 664 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 DEFB133Q30KQ1 61 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 DOK6Q6PKX4 331 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 TAF8Q7Z7C8 310 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 SLCO6A1Q86UG4 719 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 ACTRT1Q8TDG2 376 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 ADAMTS14Q8WXS8 1223 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 COX14Q96I36 57 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 APOLD1Q96LR9 279 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 C19orf43Q9BQ61 176 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 CLPBQ9H078 707 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 RMI1Q9H9A7 625 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 ETNK1Q9HBU6 452 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 BPIFA1Q9NP55 256 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 RAB6BQ9NRW1 208 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 TRNAU1APQ9NX07 287 aaKnown RBP16.29■□□□□ 0.2
PKD1-226ENST00000562425 VPS18Q9P253 973 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 KLK13Q9UKR3 277 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 TMEM98Q9Y2Y6 226 aa16.29■□□□□ 0.2
PKD1-226ENST00000562425 COL5A1P20908 1838 aaPredicted RBP16.29■□□□□ 0.2
PKD1-226ENST00000562425 GOLGA6L10A0A0M3HER8 536 aa16.28■□□□□ 0.2
PKD1-226ENST00000562425 FADS2P1A8MWK0 482 aa16.28■□□□□ 0.2
PKD1-226ENST00000562425 SLC25A14O95258 325 aaPredicted RBP16.28■□□□□ 0.2
PKD1-226ENST00000562425 CKMT1AP12532 417 aa16.28■□□□□ 0.2
PKD1-226ENST00000562425 ACP1P24666 158 aa16.28■□□□□ 0.2
PKD1-226ENST00000562425 SPAM1P38567 509 aa16.28■□□□□ 0.2
PKD1-226ENST00000562425 GNPDA1P46926 289 aa16.28■□□□□ 0.2
PKD1-226ENST00000562425 ILF3Q12906 894 aaKnown RBP eCLIP16.28■□□□□ 0.2
PKD1-226ENST00000562425 COL9A2Q14055 689 aaPredicted RBP16.28■□□□□ 0.2
PKD1-226ENST00000562425 CCDC157Q569K6 752 aa16.28■□□□□ 0.2
PKD1-226ENST00000562425 C6orf132Q5T0Z8 1188 aa16.28■□□□□ 0.2
PKD1-226ENST00000562425 DENND5AQ6IQ26 1287 aa16.28■□□□□ 0.2
PKD1-226ENST00000562425 PHYKPLQ8IUZ5 450 aa16.28■□□□□ 0.2
PKD1-226ENST00000562425 TAB3Q8N5C8 712 aaPredicted RBP16.28■□□□□ 0.2
PKD1-226ENST00000562425 PRELID2Q8N945 189 aa16.28■□□□□ 0.2
PKD1-226ENST00000562425 GLYATL1Q969I3 302 aa16.28■□□□□ 0.2
PKD1-226ENST00000562425 MAGOHBQ96A72 148 aaKnown RBP16.28■□□□□ 0.2
PKD1-226ENST00000562425 SCARF2Q96GP6 870 aaPredicted RBP16.28■□□□□ 0.2
PKD1-226ENST00000562425 MS4A14Q96JA4 679 aa16.28■□□□□ 0.2
PKD1-226ENST00000562425 GSDMCQ9BYG8 508 aa16.28■□□□□ 0.2
PKD1-226ENST00000562425 CAAP1Q9H8G2 361 aa16.28■□□□□ 0.2
PKD1-226ENST00000562425 CNOT6Q9ULM6 557 aaKnown RBP16.28■□□□□ 0.2
PKD1-226ENST00000562425 SUFUQ9UMX1 484 aa16.28■□□□□ 0.2
PKD1-226ENST00000562425 ITPR1Q14643 2758 aa16.28■□□□□ 0.2
PKD1-226ENST00000562425 TDRD6O60522 2096 aaKnown RBP16.28■□□□□ 0.2
PKD1-226ENST00000562425 GLYATL1P3A0A0U1RQE8 302 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 GPR89AB7ZAQ6 455 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 RFPL3O75679 317 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 GPR89BP0CG08 455 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 POLD2P49005 469 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 DNAJC3Q13217 504 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 OLIG2Q13516 323 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 SEMA5AQ13591 1074 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 ITGA9Q13797 1035 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 PPP1R21Q6ZMI0 780 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 RAB44Q7Z6P3 723 aaPredicted RBP16.27■□□□□ 0.2
PKD1-226ENST00000562425 TRIM74Q86UV6 250 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 GALNT13Q8IUC8 556 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 PNPLA1Q8N8W4 532 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 DNAAF3Q8N9W5 541 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 COG1Q8WTW3 980 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 VPS35Q96QK1 796 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 OR2M4Q96R27 311 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 TMEM168Q9H0V1 697 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 TRIM39Q9HCM9 518 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 IL26Q9NPH9 171 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 TOR4AQ9NXH8 423 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 APPL1Q9UKG1 709 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 GPR34Q9UPC5 381 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 LHX6Q9UPM6 363 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 GPSM3Q9Y4H4 160 aa16.27■□□□□ 0.2
PKD1-226ENST00000562425 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.27■□□□□ 0.2
PKD1-226ENST00000562425 CTAGE9A4FU28 777 aa16.26■□□□□ 0.19
PKD1-226ENST00000562425 BUD23O43709 281 aaKnown RBP16.26■□□□□ 0.19
PKD1-226ENST00000562425 SUN1O94901 812 aa16.26■□□□□ 0.19
PKD1-226ENST00000562425 DKK1O94907 266 aa16.26■□□□□ 0.19
PKD1-226ENST00000562425 ETS1P14921 441 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms