RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 FOXK1P85037 733 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 CDK18Q07002 472 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 ADCY2Q08462 1091 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 PEX6Q13608 980 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 NR1D2Q14995 579 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 PRKD1Q15139 912 aaPredicted RBP10.21□□□□□ -0.77
CLK3-205ENST00000561673 PCSK7Q16549 785 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 TEX44Q53QW1 395 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 ARHGAP40Q5TG30 622 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 KAZNQ674X7 775 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 ZNF574Q6ZN55 896 aaPredicted RBP10.21□□□□□ -0.77
CLK3-205ENST00000561673 USP53Q70EK8 1073 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 LYSMD3Q7Z3D4 306 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 PIM3Q86V86 326 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 GALNT13Q8IUC8 556 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 SLITRK4Q8IW52 837 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 SPATA22Q8NHS9 363 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 CCDC97Q96F63 343 aaPredicted RBP10.21□□□□□ -0.77
CLK3-205ENST00000561673 GOLPH3Q9H4A6 298 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 ZFYVE1Q9HBF4 777 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 RDH14Q9HBH5 336 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 GLOD4Q9HC38 313 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 MAGEE1Q9HCI5 957 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 PKD2L2Q9NZM6 624 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 SHOC2Q9UQ13 582 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 LOXL2Q9Y4K0 774 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 PCDHGA7Q9Y5G6 932 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 PCDHA13Q9Y5I0 950 aa10.21□□□□□ -0.77
CLK3-205ENST00000561673 TRBV23OR9-2A0A075B6M9 112 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 TEX51A0A1B0GUA7 166 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 EIF4E1BA6NMX2 242 aaKnown RBP10.2□□□□□ -0.78
CLK3-205ENST00000561673 PSTPIP1O43586 416 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 CST8O60676 142 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 CPNE6O95741 557 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 EML2O95834 649 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 JMJD7P0C870 316 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 PECAM1P16284 738 aaPredicted RBP10.2□□□□□ -0.78
CLK3-205ENST00000561673 ITIH1P19827 911 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 PTPN3P26045 913 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 UCNP55089 124 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 WASHC5Q12768 1159 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 CLN3Q13286 438 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 LRP8Q14114 963 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 TFDP2Q14188 446 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 PHF19Q5T6S3 580 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 NKAIN2Q5VXU1 208 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 SPOCD1Q6ZMY3 1216 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 BZW1Q7L1Q6 419 aaKnown RBP10.2□□□□□ -0.78
CLK3-205ENST00000561673 CHST15Q7LFX5 561 aaPredicted RBP10.2□□□□□ -0.78
CLK3-205ENST00000561673 TMC3Q7Z5M5 1100 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 JAMLQ86YT9 394 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 CCDC170Q8IYT3 715 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 GPR26Q8NDV2 337 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 TFB1MQ8WVM0 346 aaKnown RBP10.2□□□□□ -0.78
CLK3-205ENST00000561673 TMEM159Q96B96 161 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 TEKT5Q96M29 485 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 CMKLR1Q99788 373 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 NUDT22Q9BRQ3 303 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 ANP32EQ9BTT0 268 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 UBP1Q9NZI7 540 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 VPS18Q9P253 973 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 PISDQ9UG56 409 aa10.2□□□□□ -0.78
CLK3-205ENST00000561673 IGHV1OR21-1A0A087WYE8 117 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 A0A0A6YYK5 440 aaPredicted RBP10.19□□□□□ -0.78
CLK3-205ENST00000561673 IGHV5-10-1A0A0J9YXX1 117 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 ATXN7O15265 892 aaPredicted RBP10.19□□□□□ -0.78
CLK3-205ENST00000561673 NVLO15381 856 aaKnown RBP10.19□□□□□ -0.78
CLK3-205ENST00000561673 ZW10O43264 779 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 PMPCBO75439 489 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 ZRANB2O95218 330 aaKnown RBP eCLIP10.19□□□□□ -0.78
CLK3-205ENST00000561673 PRB1P04280 392 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 CD68P34810 354 aaPredicted RBP10.19□□□□□ -0.78
CLK3-205ENST00000561673 ETV5P41161 510 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 MARCKSL1P49006 195 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 CFHR1Q03591 330 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 VAC14Q08AM6 782 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 BIRC2Q13490 618 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 SQSTM1Q13501 440 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 SPA17Q15506 151 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 SLC14A2Q15849 920 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 MAP9Q49MG5 647 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 TFDP3Q5H9I0 405 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 ZNF648Q5T619 568 aaPredicted RBP10.19□□□□□ -0.78
CLK3-205ENST00000561673 ALS2CLQ60I27 953 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 PCSK4Q6UW60 755 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 KATNAL2Q8IYT4 538 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 RCOR2Q8IZ40 523 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 SFRP1Q8N474 314 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 RCBTB1Q8NDN9 531 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 SLC39A7Q92504 469 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 SPATA16Q9BXB7 569 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 RMI1Q9H9A7 625 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 ARFGAP3Q9NP61 516 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 ATXN10Q9UBB4 475 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 TBC1D29Q9UFV1 150 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 KCNK6Q9Y257 313 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 ZNF711Q9Y462 761 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 PTPRQQ9UMZ3 2332 aa10.19□□□□□ -0.78
CLK3-205ENST00000561673 KIF26BQ2KJY2 2108 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 hCG_1818297A0A087WSY0 165 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms