RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 TPTEP56180 551 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 DMPKQ09013 629 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 MBTPS1Q14703 1052 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 TBCELQ5QJ74 424 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 GTF2IRD2BQ6EKJ0 949 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 NAPEPLDQ6IQ20 393 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 LRRC8EQ6NSJ5 796 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 C8orf82Q6P1X6 216 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 SLC24A5Q71RS6 500 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 RNF180Q86T96 592 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 AKAP14Q86UN6 197 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 GTF2IRD2Q86UP8 949 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 SCN4BQ8IWT1 228 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 TNS4Q8IZW8 715 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 PELI3Q8N2H9 469 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 ELMOD1Q8N336 334 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 ATPAF2Q8N5M1 289 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 PCDH20Q8N6Y1 951 aaKnown RBP13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 LINC01599Q8WXQ3 324 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 SNX19Q92543 992 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 HERC2P3Q9BVR0 1158 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 HOXD1Q9GZZ0 328 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 CATSPERBQ9H7T0 1116 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 SP140LQ9H930 580 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 CHRAC1Q9NRG0 131 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 GMIPQ9P107 970 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 IFT80Q9P2H3 777 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 POU2F3Q9UKI9 436 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 FNDC1Q4ZHG4 1894 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 PLXNA3P51805 1871 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 NYNRINQ9P2P1 1898 aaKnown RBP13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 RNF103-CHMP3A0A140T963 221 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 ILVBLA1L0T0 632 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 KCNU1A8MYU2 1149 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 TMEM189-UBE2V1I3L0A0 370 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 AP3B1O00203 1094 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 PHGDHO43175 533 aaKnown RBP13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 ABCB7O75027 752 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 OAZ2O95190 189 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 CHRNGP07510 517 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 DNAJB1P25685 340 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 SERPINB1P30740 379 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 RCVRNP35243 200 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 HADHAP40939 763 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 KRT6CP48668 564 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 MLLT10P55197 1068 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 FAM189BP81408 668 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 CDH17Q12864 832 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 SPATS1Q496A3 300 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 NOMO2Q5JPE7 1267 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 TMEM198Q66K66 360 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 LINC00523Q86TU6 105 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 KCNMB4Q86W47 210 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 PIK3C3Q8NEB9 887 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 PDZD8Q8NEN9 1154 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 OR7G1Q8NGA0 311 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 AGR3Q8TD06 166 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 ZNF419Q96HQ0 510 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 BTN2A3PQ96KV6 586 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 IL12RB2Q99665 862 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 SLC39A8Q9C0K1 460 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 FANCEQ9HB96 536 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 QPCTLQ9NXS2 382 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 ABI2Q9NYB9 513 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 DNMT3BQ9UBC3 853 aaKnown RBP13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 VPS51Q9UID3 782 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 MAGED2Q9UNF1 606 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 CROCCQ5TZA2 2017 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 A0A096LPK6 155 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 MAFKO60675 156 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 DNAJB2P25686 324 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 PSMA4P25789 261 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 GSTM2P28161 218 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 NMBRP28336 390 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 GMPRP36959 345 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 GRIA4P48058 902 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 BNIP2Q12982 314 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 E2F2Q14209 437 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 CBX2Q14781 532 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 ARL13AQ5H913 290 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 PERM1Q5SV97 790 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 AFMIDQ63HM1 303 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 FSTL4Q6MZW2 842 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 PRMT9Q6P2P2 845 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 GK5Q6ZS86 529 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 CMC1Q7Z7K0 106 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 LACC1Q8IV20 430 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 DCP1BQ8IZD4 617 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 URGCPQ8TCY9 931 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 CHAC2Q8WUX2 184 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 CANT1Q8WVQ1 401 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 ROPN1LQ96C74 230 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 ZNF486Q96H40 463 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 FAR2Q96K12 515 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 FCRL5Q96RD9 977 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 MCMBPQ9BTE3 642 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 SLC25A23Q9BV35 468 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 KIFC1Q9BW19 673 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms