RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 UBE2HP62256 183 aa18.36■□□□□ 0.53
TPM1-226ENST00000560959 DPYSQ14117 519 aa18.36■□□□□ 0.53
TPM1-226ENST00000560959 ACAD10Q6JQN1 1059 aa18.36■□□□□ 0.53
TPM1-226ENST00000560959 ARFGAP1Q8N6T3 406 aa18.36■□□□□ 0.53
TPM1-226ENST00000560959 SEC14L1Q92503 715 aa18.36■□□□□ 0.53
TPM1-226ENST00000560959 SCAMP4Q969E2 229 aa18.36■□□□□ 0.53
TPM1-226ENST00000560959 C9orf72Q96LT7 481 aa18.36■□□□□ 0.53
TPM1-226ENST00000560959 AGPAT1Q99943 283 aa18.36■□□□□ 0.53
TPM1-226ENST00000560959 CNOT8Q9UFF9 292 aaKnown RBP18.36■□□□□ 0.53
TPM1-226ENST00000560959 DNPEPQ9ULA0 475 aa18.36■□□□□ 0.53
TPM1-226ENST00000560959 EPHB6O15197 1021 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 FZD6O60353 706 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 CREG1O75629 220 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 MT-ND3P03897 115 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 CCNYL3P0C7X3 344 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 ZNF28P17035 718 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 PSMA2P25787 234 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 KLK7P49862 253 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 CLCNKAP51800 687 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 FOXM1Q08050 763 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 MAMLD1Q13495 774 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 BECN1Q14457 450 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 DPCR1Q3MIW9 517 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 LRRC66Q68CR7 880 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 PPP1R2P3Q6NXS1 205 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 RFLNAQ6ZTI6 216 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 CHST15Q7LFX5 561 aaPredicted RBP18.35■□□□□ 0.53
TPM1-226ENST00000560959 TRIM74Q86UV6 250 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 STAMBPL1Q96FJ0 436 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 PARVAQ9NVD7 372 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 TAB2Q9NYJ8 693 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 CWC15Q9P013 229 aaKnown RBP18.35■□□□□ 0.53
TPM1-226ENST00000560959 CPNE7Q9UBL6 633 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 KLHL3Q9UH77 587 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 CD84Q9UIB8 345 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 PADI1Q9ULC6 663 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 MAP4K5Q9Y4K4 846 aa18.35■□□□□ 0.53
TPM1-226ENST00000560959 RP1L1Q8IWN7 2480 aaPredicted RBP18.34■□□□□ 0.53
TPM1-226ENST00000560959 MAFKO60675 156 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 RNF8O76064 485 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 ASMTLO95671 621 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 FGF5P12034 268 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 ATP1A3P13637 1013 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 TNFAIP3P21580 790 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 GARSP41250 739 aaKnown RBP18.34■□□□□ 0.53
TPM1-226ENST00000560959 SEMA5AQ13591 1074 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 PTPRRQ15256 657 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 PPP6R3Q5H9R7 873 aaPredicted RBP18.34■□□□□ 0.53
TPM1-226ENST00000560959 FKBP15Q5T1M5 1219 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 MARC1Q5VT66 337 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 CYP4V2Q6ZWL3 525 aaPredicted RBP18.34■□□□□ 0.53
TPM1-226ENST00000560959 TP53INP2Q8IXH6 220 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 GALNT6Q8NCL4 622 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 FNIP1Q8TF40 1166 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 NSMCE1Q8WV22 266 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 PEBP4Q96S96 227 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 AGAP2Q99490 1192 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 TWSG1Q9GZX9 223 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 ZNF768Q9H5H4 540 aaKnown RBP18.34■□□□□ 0.53
TPM1-226ENST00000560959 ZWILCHQ9H900 591 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 SEPT11Q9NVA2 429 aaKnown RBP18.34■□□□□ 0.53
TPM1-226ENST00000560959 PCSK1NQ9UHG2 260 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 SIK3Q9Y2K2 1263 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 ITPR2Q14571 2701 aa18.34■□□□□ 0.53
TPM1-226ENST00000560959 A0A0J9YYE9 177 aa18.33■□□□□ 0.52
TPM1-226ENST00000560959 PIPSLA2A3N6 862 aa18.33■□□□□ 0.52
TPM1-226ENST00000560959 C21orf140B9A014 251 aa18.33■□□□□ 0.52
TPM1-226ENST00000560959 PRPSAP2O60256 369 aa18.33■□□□□ 0.52
TPM1-226ENST00000560959 KATNA1O75449 491 aa18.33■□□□□ 0.52
TPM1-226ENST00000560959 NDUFA10O95299 355 aa18.33■□□□□ 0.52
TPM1-226ENST00000560959 TRBC1P01850 177 aa18.33■□□□□ 0.52
TPM1-226ENST00000560959 PDGFAP04085 211 aa18.33■□□□□ 0.52
TPM1-226ENST00000560959 TPM2P07951 284 aa18.33■□□□□ 0.52
TPM1-226ENST00000560959 CTPS1P17812 591 aa18.33■□□□□ 0.52
TPM1-226ENST00000560959 XRCC1P18887 633 aaPredicted RBP18.33■□□□□ 0.52
TPM1-226ENST00000560959 MAPK9P45984 424 aa18.33■□□□□ 0.52
TPM1-226ENST00000560959 STC1P52823 247 aa18.33■□□□□ 0.52
TPM1-226ENST00000560959 CDH6P55285 790 aa18.33■□□□□ 0.52
TPM1-226ENST00000560959 UBE2IP63279 158 aaKnown RBP18.33■□□□□ 0.52
TPM1-226ENST00000560959 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.33■□□□□ 0.52
TPM1-226ENST00000560959 PLEKHA7Q6IQ23 1121 aa18.33■□□□□ 0.52
TPM1-226ENST00000560959 CYB5D1Q6P9G0 228 aa18.33■□□□□ 0.52
TPM1-226ENST00000560959 THAP4Q8WY91 577 aa18.33■□□□□ 0.52
TPM1-226ENST00000560959 RIOK2Q9BVS4 552 aaKnown RBP18.33■□□□□ 0.52
TPM1-226ENST00000560959 TBC1D10AQ9BXI6 508 aa18.33■□□□□ 0.52
TPM1-226ENST00000560959 MLXIPLQ9NP71 852 aa18.33■□□□□ 0.52
TPM1-226ENST00000560959 CNOT6Q9ULM6 557 aaKnown RBP18.33■□□□□ 0.52
TPM1-226ENST00000560959 PCDHGA9Q9Y5G4 932 aaKnown RBP18.33■□□□□ 0.52
TPM1-226ENST00000560959 PCYT1BQ9Y5K3 369 aaPredicted RBP18.33■□□□□ 0.52
TPM1-226ENST00000560959 OAS3Q9Y6K5 1087 aaKnown RBP18.33■□□□□ 0.52
TPM1-226ENST00000560959 CDC14CA4D256 554 aa18.32■□□□□ 0.52
TPM1-226ENST00000560959 SEMA7AO75326 666 aa18.32■□□□□ 0.52
TPM1-226ENST00000560959 KIAA0754O94854 1291 aa18.32■□□□□ 0.52
TPM1-226ENST00000560959 PDHA1P08559 390 aa18.32■□□□□ 0.52
TPM1-226ENST00000560959 CES1P23141 567 aa18.32■□□□□ 0.52
TPM1-226ENST00000560959 MIPP30301 263 aa18.32■□□□□ 0.52
TPM1-226ENST00000560959 MMP13P45452 471 aa18.32■□□□□ 0.52
TPM1-226ENST00000560959 PAPD7Q5XG87 772 aaKnown RBP18.32■□□□□ 0.52
TPM1-226ENST00000560959 LRRC49Q8IUZ0 686 aa18.32■□□□□ 0.52
TPM1-226ENST00000560959 RASGRP3Q8IV61 690 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms