RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 GLT6D1Q7Z4J2 308 aa15.15■□□□□ 0.02
SNRPA1-213ENST00000560856 SFTPA2Q8IWL1 248 aa15.15■□□□□ 0.02
SNRPA1-213ENST00000560856 PDCD7Q8N8D1 485 aaKnown RBP15.15■□□□□ 0.02
SNRPA1-213ENST00000560856 BRSK1Q8TDC3 778 aa15.15■□□□□ 0.02
SNRPA1-213ENST00000560856 MS4A14Q96JA4 679 aa15.15■□□□□ 0.02
SNRPA1-213ENST00000560856 PBKQ96KB5 322 aa15.15■□□□□ 0.02
SNRPA1-213ENST00000560856 ZSCAN5AQ9BUG6 496 aa15.15■□□□□ 0.02
SNRPA1-213ENST00000560856 SPATA16Q9BXB7 569 aa15.15■□□□□ 0.02
SNRPA1-213ENST00000560856 ETNK1Q9HBU6 452 aa15.15■□□□□ 0.02
SNRPA1-213ENST00000560856 VPS18Q9P253 973 aa15.15■□□□□ 0.02
SNRPA1-213ENST00000560856 MOSPD1Q9UJG1 213 aa15.15■□□□□ 0.02
SNRPA1-213ENST00000560856 PLEKHM1Q9Y4G2 1056 aa15.15■□□□□ 0.02
SNRPA1-213ENST00000560856 KCTD3Q9Y597 815 aa15.15■□□□□ 0.02
SNRPA1-213ENST00000560856 ARL5AQ9Y689 179 aa15.15■□□□□ 0.02
SNRPA1-213ENST00000560856 PLXNB3Q9ULL4 1909 aa15.15■□□□□ 0.02
SNRPA1-213ENST00000560856 AKAP13Q12802 2813 aa15.15■□□□□ 0.02
SNRPA1-213ENST00000560856 EME2A4GXA9 379 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 IFNB1P01574 187 aa15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 ZSCAN5DPP0CG00 497 aa15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 RPL22P35268 128 aaKnown RBP15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 GNPDA1P46926 289 aa15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 KCNJ1P48048 391 aa15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 DAB2P98082 770 aa15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 TAF1AQ15573 450 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 ATP13A5Q4VNC0 1218 aa15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 KHDC1Q4VXA5 237 aaKnown RBP15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 HS1BP3Q53T59 392 aa15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 CCDC157Q569K6 752 aa15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 ZNF648Q5T619 568 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 GKN2Q86XP6 184 aa15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 TAB3Q8N5C8 712 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 GPR156Q8NFN8 814 aa15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 COG1Q8WTW3 980 aa15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 GLYATL1Q969I3 302 aa15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 TMEM121BQ9BXQ6 578 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 LRRC40Q9H9A6 602 aa15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 ARFGAP3Q9NP61 516 aa15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 FEZ2Q9UHY8 353 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 NEUROG3Q9Y4Z2 214 aa15.14■□□□□ 0.01
SNRPA1-213ENST00000560856 PSMD3O43242 534 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 LDB2O43679 373 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 KIF5CO60282 957 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 NOBOXO60393 691 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 CDK4P11802 303 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 LPOP22079 712 aaPredicted RBP15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 AK4P27144 223 aaPredicted RBP15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 CLDN6P56747 220 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 CTBSQ01459 385 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 SEMA5AQ13591 1074 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 CHRNA6Q15825 494 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 GUSBP11Q6P575 273 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 MARK2Q7KZI7 788 aaKnown RBP15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 TAF8Q7Z7C8 310 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 KYQ8NBH2 561 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 VPS35Q96QK1 796 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 OR2M4Q96R27 311 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 OSBPL9Q96SU4 736 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 SUDS3Q9H7L9 328 aaPredicted RBP15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 TRIM39Q9HCM9 518 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 SPATS2LQ9NUQ6 558 aaKnown RBP15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 SMARCAL1Q9NZC9 954 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 NCKIPSDQ9NZQ3 722 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 ATXN10Q9UBB4 475 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 SNX12Q9UMY4 172 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 GPR34Q9UPC5 381 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 MSRB2Q9Y3D2 182 aa15.13■□□□□ 0.01
SNRPA1-213ENST00000560856 FRYQ5TBA9 3013 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 STX7O15400 261 aaKnown RBP15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 GPR39O43194 453 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 NUAK1O60285 661 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 UGT1A9O60656 530 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 PPFIA2O75334 1257 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 SUN1O94901 812 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 SLC25A14O95258 325 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 ASMTLO95671 621 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 GP1BAP07359 652 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 ZNF8P17098 575 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 TPH1P17752 444 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 UGT1A6P19224 532 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 UGT1A1P22309 533 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 UGT1A4P22310 534 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 PSMA3P25788 255 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 UGT1A3P35503 534 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 UGT1A5P35504 534 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 FDFT1P37268 417 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 SPAM1P38567 509 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 DUSP3P51452 185 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 ZNF140P52738 457 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 XIAPP98170 497 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 CCDC173Q0VFZ6 552 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 NR0B2Q15466 257 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 CYP1B1Q16678 543 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 KCTD19Q17RG1 926 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 PERM1Q5SV97 790 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 ZDHHC20Q5W0Z9 365 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 TTC27Q6P3X3 843 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 CCNI2Q6ZMN8 369 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 ADGRG6Q86SQ4 1221 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 C17orf82Q86X59 251 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 MARCH9Q86YJ5 346 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms