RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 CACNG1Q06432 222 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 SLC14A1Q13336 389 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 ITIH4Q14624 930 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 TRADDQ15628 312 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 CHRNA6Q15825 494 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 KIF19Q2TAC6 998 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 ATP13A5Q4VNC0 1218 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 TRIM61Q5EBN2 209 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 LYPLAL1Q5VWZ2 237 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 CEP128Q6ZU80 1094 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 ASCL5Q7RTU5 278 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 HEATR4Q86WZ0 1026 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 SNX19Q92543 992 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 ULK4Q96C45 1275 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 TCF12Q99081 682 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 ELF4Q99607 663 aaPredicted RBP12.02□□□□□ -0.49
IRF9-211ENST00000560852 NUSAP1Q9BXS6 441 aaKnown RBP12.02□□□□□ -0.49
IRF9-211ENST00000560852 MIR1-1HGQ9H1L0 117 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 PLAC1Q9HBJ0 212 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 EPB41L5Q9HCM4 733 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 BPIFA1Q9NP55 256 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 SEMA4GQ9NTN9 838 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 PIH1D1Q9NWS0 290 aaKnown RBP12.02□□□□□ -0.49
IRF9-211ENST00000560852 MOCS1Q9NZB8 636 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 DNMT3AQ9Y6K1 912 aaPredicted RBP12.02□□□□□ -0.49
IRF9-211ENST00000560852 CSNK1G3Q9Y6M4 447 aa12.02□□□□□ -0.49
IRF9-211ENST00000560852 A0A1B0GVT2 93 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 KLHL33A6NCF5 533 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 PCDHGA12O60330 932 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 KCNJ13O60928 360 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 PRAMEF1O95521 474 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 PCCBP05166 539 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 NME1P15531 152 aaKnown RBP12.01□□□□□ -0.49
IRF9-211ENST00000560852 PAMP19021 973 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 NMBRP28336 390 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 BLKP51451 505 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 CLCNKAP51800 687 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 PLTPP55058 493 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 MRPS25P82663 173 aaKnown RBP12.01□□□□□ -0.49
IRF9-211ENST00000560852 DHX9Q08211 1270 aaKnown RBP12.01□□□□□ -0.49
IRF9-211ENST00000560852 GRIK2Q13002 908 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 EIF2B5Q13144 721 aaKnown RBP12.01□□□□□ -0.49
IRF9-211ENST00000560852 PTPRCAPQ14761 206 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 LPAL2Q16609 132 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 KCTD19Q17RG1 926 aaPredicted RBP12.01□□□□□ -0.49
IRF9-211ENST00000560852 CCDC38Q502W7 563 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 SPANXN3Q5MJ09 141 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 LDLRAP1Q5SW96 308 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 TPRG1LQ5T0D9 272 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 DENND2CQ68D51 928 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 RAET1GQ6H3X3 334 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 AFTPHQ6ULP2 937 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 PACS1Q6VY07 963 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 CENPUQ71F23 418 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 KANSL1Q7Z3B3 1105 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 GALNT7Q86SF2 657 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 PARGQ86W56 976 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 IFT20Q8IY31 132 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 OR56A4Q8NGH8 313 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 OR4L1Q8NH43 312 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 HDAC10Q969S8 669 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 MFSD3Q96ES6 412 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 STAMBPL1Q96FJ0 436 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 ZNF514Q96K75 400 aaPredicted RBP12.01□□□□□ -0.49
IRF9-211ENST00000560852 LINC00615Q96LM1 132 aaPredicted RBP12.01□□□□□ -0.49
IRF9-211ENST00000560852 WDR92Q96MX6 357 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 FCRL3Q96P31 734 aaPredicted RBP12.01□□□□□ -0.49
IRF9-211ENST00000560852 WDR83Q9BRX9 315 aaKnown RBP12.01□□□□□ -0.49
IRF9-211ENST00000560852 LGR4Q9BXB1 951 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 SPATA16Q9BXB7 569 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 FUT8Q9BYC5 575 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 TRIM31Q9BZY9 425 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 DPH5Q9H2P9 285 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 PARD6AQ9NPB6 346 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 TRNAU1APQ9NX07 287 aaKnown RBP12.01□□□□□ -0.49
IRF9-211ENST00000560852 SAMD15Q9P1V8 674 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 SLC2A6Q9UGQ3 507 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 CD84Q9UIB8 345 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 FKBPLQ9UIM3 349 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 GPR34Q9UPC5 381 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 CA5BQ9Y2D0 317 aa12.01□□□□□ -0.49
IRF9-211ENST00000560852 OTOGLQ3ZCN5 2332 aa12□□□□□ -0.49
IRF9-211ENST00000560852 THADAQ6YHU6 1953 aa12□□□□□ -0.49
IRF9-211ENST00000560852 A0A1B0GTQ1 180 aa12□□□□□ -0.49
IRF9-211ENST00000560852 LNP1A1A4G5 178 aa12□□□□□ -0.49
IRF9-211ENST00000560852 CCDC162PA2VCL2 907 aa12□□□□□ -0.49
IRF9-211ENST00000560852 TMEM202A6NGA9 273 aa12□□□□□ -0.49
IRF9-211ENST00000560852 PRR19A6NJB7 356 aa12□□□□□ -0.49
IRF9-211ENST00000560852 PATE3B3GLJ2 98 aa12□□□□□ -0.49
IRF9-211ENST00000560852 GOLGA8MH3BSY2 632 aa12□□□□□ -0.49
IRF9-211ENST00000560852 CDX4O14627 284 aaPredicted RBP12□□□□□ -0.49
IRF9-211ENST00000560852 BUD23O43709 281 aaKnown RBP12□□□□□ -0.49
IRF9-211ENST00000560852 NUAK1O60285 661 aa12□□□□□ -0.49
IRF9-211ENST00000560852 DNAJC6O75061 913 aa12□□□□□ -0.49
IRF9-211ENST00000560852 FUCA1P04066 466 aa12□□□□□ -0.49
IRF9-211ENST00000560852 TUBBP07437 444 aa12□□□□□ -0.49
IRF9-211ENST00000560852 GSTM1P09488 218 aa12□□□□□ -0.49
IRF9-211ENST00000560852 ITGALP20701 1170 aa12□□□□□ -0.49
IRF9-211ENST00000560852 MC4RP32245 332 aa12□□□□□ -0.49
IRF9-211ENST00000560852 HK3P52790 923 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms