RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 AGTP01019 485 aa12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 FGF1P05230 155 aa12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 BPIP17213 487 aa12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 PPM1FP49593 454 aaPredicted RBP12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 CCZ1BP86790 482 aa12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 CCZ1P86791 482 aaPredicted RBP12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 SPIDRQ14159 915 aa12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 PHYKPLQ8IUZ5 450 aa12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 TAB3Q8N5C8 712 aaPredicted RBP12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 Q8N9G6 341 aaPredicted RBP12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 KDF1Q8NAX2 398 aaPredicted RBP12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 OR6C4Q8NGE1 309 aa12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 COX14Q96I36 57 aa12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 SPATA13Q96N96 652 aa12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 PPP1R2P1Q96PQ5 205 aa12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 TMEM121Q9BTD3 319 aa12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 TRABDQ9H4I3 376 aa12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 SPATS2LQ9NUQ6 558 aaKnown RBP12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 TAAR2Q9P1P5 351 aa12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 VPS18Q9P253 973 aa12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 LRIT1Q9P2V4 623 aa12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 R3HDM2Q9Y2K5 976 aaKnown RBP12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 PKP3Q9Y446 797 aa12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 OAS3Q9Y6K5 1087 aaKnown RBP12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 MYLKQ15746 1914 aa12.87□□□□□ -0.35
CTDSPL2-209ENST00000560620 TCRBV7S2A1N4TA0A589 114 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 RHPN2P1A8MT19 583 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 CSO75390 466 aaKnown RBP12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 GLB1P16278 677 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 HMGCLP35914 325 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 DCDC1P59894 354 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 KLF1Q13351 362 aaPredicted RBP12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 CAMK2BQ13554 666 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 C14orf28Q4W4Y0 310 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 PYCR3Q53H96 274 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 MEI1Q5TIA1 1274 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 RBM44Q6ZP01 1051 aaKnown RBP12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 NRROSQ86YC3 692 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 SFTPA2Q8IWL1 248 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 TRAM1L1Q8N609 369 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 DCBLD1Q8N8Z6 715 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 GPR156Q8NFN8 814 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 TRIM58Q8NG06 486 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 UBE2Q2Q8WVN8 375 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 ATG4AQ8WYN0 398 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 TTC25Q96NG3 672 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 PLEKHG4BQ96PX9 1271 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 GFM1Q96RP9 751 aaKnown RBP12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 OR2AG1Q9H205 316 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 ZNF148Q9UQR1 794 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 PLEKHM1Q9Y4G2 1056 aa12.86□□□□□ -0.35
CTDSPL2-209ENST00000560620 ASPMQ8IZT6 3477 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 TRBV23OR9-2A0A075B6M9 112 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 C2orf81A6NN90 581 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 STX7O15400 261 aaKnown RBP12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 NOBOXO60393 691 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 USP12O75317 370 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 MTX2O75431 263 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 ECEL1O95672 775 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 IFNB1P01574 187 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 RPLP0P05388 317 aaKnown RBP12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 ACP5P13686 325 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 ACTN2P35609 894 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 SPAM1P38567 509 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 MAZP56270 477 aaKnown RBP12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 OLIG2Q13516 323 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 SNX1Q13596 522 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 LRP8Q14114 963 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 SPARCL1Q14515 664 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 PARP6Q2NL67 630 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 ZNF648Q5T619 568 aaPredicted RBP12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 ZDHHC20Q5W0Z9 365 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 PDPK2PQ6A1A2 396 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 FOXR1Q6PIV2 292 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 OGFOD3Q6PK18 319 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 FAM151BQ6UXP7 276 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 WDR48Q8TAF3 677 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 GLYATL1Q969I3 302 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 TBL1YQ9BQ87 522 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 OSGEPL1Q9H4B0 414 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 ATXN10Q9UBB4 475 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 RABGEF1Q9UJ41 708 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 CNOT6Q9ULM6 557 aaKnown RBP12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 PPP2R2CQ9Y2T4 447 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 PCDHB1Q9Y5F3 818 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 RNF215Q9Y6U7 377 aa12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 MAP1BP46821 2468 aaKnown RBP12.85□□□□□ -0.35
CTDSPL2-209ENST00000560620 GLYATL1P3A0A0U1RQE8 302 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 C5orf60A6NFR6 353 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 ZW10O43264 779 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 GRID2O43424 1007 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 SNX2O60749 519 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 DNAJC6O75061 913 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 TCEA3O75764 348 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 CDK14O94921 469 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 MPOP05164 745 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 ZNF8P17098 575 aaPredicted RBP12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 ALDH4A1P30038 563 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 GDF10P55107 478 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 CCL7P80098 99 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms