RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 H7C0S8 307 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 SMAPO00193 183 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 TNFP01375 233 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 KRT14P02533 472 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 IVLP07476 585 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 PIRTP0C851 137 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 BPIP17213 487 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 DGKAP23743 735 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 CARSP49589 748 aaKnown RBP13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 SRP54P61011 504 aaKnown RBP13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 EIF2B5Q13144 721 aaKnown RBP13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 CASP8Q14790 479 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 PTPRRQ15256 657 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 SHBQ15464 509 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 TRADDQ15628 312 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 FAXCQ5TGI0 409 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 TTC27Q6P3X3 843 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 PPP1R21Q6ZMI0 780 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 MAATS1Q7Z4T9 603 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 PCGF5Q86SE9 256 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 GLRX5Q86SX6 157 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 PHYKPLQ8IUZ5 450 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 PHACTR4Q8IZ21 702 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 CAVIN3Q969G5 261 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 SCARF2Q96GP6 870 aaPredicted RBP13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 COX14Q96I36 57 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 SMIM14Q96QK8 99 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 RANBP9Q96S59 729 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 SPATA16Q9BXB7 569 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 ZCCHC2Q9C0B9 1178 aaKnown RBP13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 CASS4Q9NQ75 786 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 SMOXQ9NWM0 555 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 NLGN3Q9NZ94 848 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 NEU2Q9Y3R4 380 aa13.9□□□□□ -0.19
PKNOX1-209ENST00000560448 GLYATL1P3A0A0U1RQE8 302 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 PRSS38A1L453 326 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 FAM187AA6NFU0 413 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 K7ESM1 405 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 AURKAO14965 403 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 SCAMP1O15126 338 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 TTI1O43156 1089 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 CDK4P11802 303 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 PSMA3P25788 255 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 LRP8Q14114 963 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 DHX34Q14147 1143 aaKnown RBP13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 PPP1R7Q15435 360 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 SKIDA1Q1XH10 827 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 FAM182AQ5T1J6 154 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 EMBQ6PCB8 327 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 KANSL1Q7Z3B3 1105 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 GLIS1Q8NBF1 620 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 GPR26Q8NDV2 337 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 ZNF548Q8NEK5 533 aaPredicted RBP13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 OR2I1PQ8NGU4 316 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 STYXQ8WUJ0 223 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 PTCD2Q8WV60 388 aaKnown RBP13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 SCG3Q8WXD2 468 aaKnown RBP13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 APOL2Q9BQE5 337 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 FRMD8Q9BZ67 464 aaPredicted RBP13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 IL22Q9GZX6 179 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 VIPAS39Q9H9C1 493 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 TRNAU1APQ9NX07 287 aaKnown RBP13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 CD84Q9UIB8 345 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 PCOLCE2Q9UKZ9 415 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 SCN8AQ9UQD0 1980 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 KNL1Q8NG31 2342 aa13.89□□□□□ -0.19
PKNOX1-209ENST00000560448 CABIN1Q9Y6J0 2220 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 LAMA1P25391 3075 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 ASCC3Q8N3C0 2202 aaKnown RBP13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 ESYT3A0FGR9 886 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 MROH6A6NGR9 719 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 AQP9O43315 295 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 LDB2O43679 373 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 VEGFDO43915 354 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 USP12O75317 370 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 SLC4A1P02730 911 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 ZSCAN5DPP0CG00 497 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 MLNP12872 115 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 CTSEP14091 401 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 ETS1P14921 441 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 ADRA1DP25100 572 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 ECHS1P30084 290 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 NPY2RP49146 381 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 ZNF140P52738 457 aaPredicted RBP13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 GPS1Q13098 491 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 SPARCL1Q14515 664 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 ALG11Q2TAA5 492 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 LDLRAP1Q5SW96 308 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 LRRC8BQ6P9F7 803 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 GKN2Q86XP6 184 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 MCUQ8NE86 351 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 OR4C6Q8NH72 309 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 BAHD1Q8TBE0 780 aaPredicted RBP13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 SETD7Q8WTS6 366 aaKnown RBP13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 HEXDCQ8WVB3 486 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 GLMNQ92990 594 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 GLYATL1Q969I3 302 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 LGR4Q9BXB1 951 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 TRIM39Q9HCM9 518 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms