RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 IL1R1P14778 569 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 TCF4P15884 667 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 ERCC2P18074 760 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 KRT15P19012 456 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 CD247P20963 164 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 CCNOP22674 350 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 CPT2P23786 658 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 CCNE1P24864 410 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 RPA1P27694 616 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 SLC26A3P40879 764 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 CRATP43155 626 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 CRKLP46109 303 aaKnown RBP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 FASLGP48023 281 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 LEPRP48357 1165 aaKnown RBP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 SLC1A6P48664 564 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 PIK3CGP48736 1102 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 ENTPD1P49961 510 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 CLCN5P51795 746 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 MAP2K6P52564 334 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 CAPZA1P52907 286 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 PRKAA2P54646 552 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 PRMT2P55345 433 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 ITGA1P56199 1179 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 HNRNPKP61978 463 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 ZNF33BQ06732 778 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 KLC1Q07866 573 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 SCRN1Q12765 414 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 SRSF5Q13243 272 aaKnown RBP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 NR1D2Q14995 579 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 PRKD1Q15139 912 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 SSX2Q16385 188 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 CAMK4Q16566 473 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 KRT24Q2M2I5 525 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 SMTNL2Q2TAL5 461 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 HNRNPA1L2Q32P51 320 aaKnown RBP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 C3orf36Q3SXR2 165 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 ZNF667Q5HYK9 610 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 ZNF311Q5JNZ3 666 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 TEX30Q5JUR7 227 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 PIP5KL1Q5T9C9 394 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 ARHGEF16Q5VV41 709 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 SLFN13Q68D06 897 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 SNRNP48Q6IEG0 339 aaKnown RBP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 SULT1C3Q6IMI6 304 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 C3orf33Q6P1S2 294 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 TTC33Q6PID6 262 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 TMEM270Q6UE05 265 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 ADCK2Q7Z695 626 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 MCATQ8IVS2 390 aaKnown RBP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 SP8Q8IXZ3 490 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 CISD2Q8N5K1 135 aaKnown RBP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 FNDC5Q8NAU1 212 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 NHLRC2Q8NBF2 726 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 GLB1L3Q8NCI6 653 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 PPFIBP2Q8ND30 876 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 BPIFCQ8NFQ6 507 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 NEK11Q8NG66 645 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 OR6Q1Q8NGQ2 317 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 LRRC8CQ8TDW0 803 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 PANK1Q8TE04 598 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 EDAQ92838 391 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 DYDC2Q96IM9 177 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 SAMD8Q96LT4 415 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 COQ10AQ96MF6 247 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 ZNF558Q96NG5 402 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 OR1F2PQ96R84 312 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 CCNL2Q96S94 520 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 INTS14Q96SY0 518 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 ELF4Q99607 663 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 GDF15Q99988 308 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 CHID1Q9BWS9 393 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 SPATA16Q9BXB7 569 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 NKX2-4Q9H2Z4 354 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 SP110Q9HB58 689 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 EPB41L5Q9HCM4 733 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 DIABLOQ9NR28 239 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 CHRAC1Q9NRG0 131 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 C19orf12Q9NSK7 152 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 FBXO34Q9NWN3 711 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 ELOVL2Q9NXB9 296 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 KLHL8Q9P2G9 620 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 CGGBP1Q9UFW8 167 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 ARMCX3Q9UH62 379 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 NARFQ9UHQ1 456 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 LNPEPQ9UIQ6 1025 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 ADAM30Q9UKF2 790 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 MAN1B1Q9UKM7 699 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 INTS6Q9UL03 887 aaKnown RBP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 TMPRSS11EQ9UL52 423 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 DNPEPQ9ULA0 475 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 PPIEQ9UNP9 301 aaKnown RBP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 ENTPD4Q9Y227 616 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 DTX4Q9Y2E6 619 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 IFT52Q9Y366 437 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 TSC22D4Q9Y3Q8 395 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 FAM32AQ9Y421 112 aaKnown RBP4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 PLEKHM1Q9Y4G2 1056 aa4.5□□□□□ -1.69
HMGB3P26-201ENST00000560051 PCDHB1Q9Y5F3 818 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms