RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 CCDC110Q8TBZ0 833 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 ZNF641Q96N77 438 aaPredicted RBP9.12□□□□□ -0.95
IDH3A-217ENST00000559889 CSPG4P5Q96PW8 444 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 WRAP53Q9BUR4 548 aaKnown RBP9.12□□□□□ -0.95
IDH3A-217ENST00000559889 PCDH12Q9NPG4 1184 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 ETNK2Q9NVF9 386 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 NLGN3Q9NZ94 848 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 F5H423 210 aaPredicted RBP9.11□□□□□ -0.95
IDH3A-217ENST00000559889 K7ESM1 405 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 DFFAO00273 331 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 AVILO75366 819 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 TM7SF2O76062 418 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 PEX11BO96011 259 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 APRTP07741 180 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 CKMT1AP12532 417 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 MYF5P13349 255 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 BRAFP15056 766 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 KRT15P19012 456 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 SUOXP51687 545 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 ZNF135P52742 658 aaPredicted RBP9.11□□□□□ -0.95
IDH3A-217ENST00000559889 HNRNPKP61978 463 aaKnown RBP eCLIP9.11□□□□□ -0.95
IDH3A-217ENST00000559889 INSM1Q01101 510 aaPredicted RBP9.11□□□□□ -0.95
IDH3A-217ENST00000559889 TARDBPQ13148 414 aaKnown RBP eCLIP9.11□□□□□ -0.95
IDH3A-217ENST00000559889 HES3Q5TGS1 186 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 C3orf62Q6ZUJ4 267 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 CPLX4Q7Z7G2 160 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 FAM181AQ8N9Y4 354 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 ZNF473Q8WTR7 871 aaKnown RBP9.11□□□□□ -0.95
IDH3A-217ENST00000559889 ECHDC3Q96DC8 303 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 TUBGCP5Q96RT8 1024 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 USP29Q9HBJ7 922 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 GPSM3Q9Y4H4 160 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 GOLGA4Q13439 2230 aaKnown RBP9.11□□□□□ -0.95
IDH3A-217ENST00000559889 FAM208BQ5VWN6 2430 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 TMEM120BA0PK00 339 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 TRAFD1O14545 582 aaPredicted RBP9.11□□□□□ -0.95
IDH3A-217ENST00000559889 FAM107AO95990 144 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 JUPP14923 745 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 IL10RBQ08334 325 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 NSUN2Q08J23 767 aaKnown RBP eCLIP9.11□□□□□ -0.95
IDH3A-217ENST00000559889 SLC10A2Q12908 348 aaPredicted RBP9.11□□□□□ -0.95
IDH3A-217ENST00000559889 GRM3Q14832 879 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 WSCD2Q2TBF2 565 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 BRAT1Q6PJG6 821 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 SRLQ86TD4 932 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 CXorf40AQ8TE69 158 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 APOLD1Q96LR9 279 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 TCEAL2Q9H3H9 227 aaPredicted RBP9.11□□□□□ -0.95
IDH3A-217ENST00000559889 PAK5Q9P286 719 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 IPO11Q9UI26 975 aaKnown RBP9.11□□□□□ -0.95
IDH3A-217ENST00000559889 CHMP2BQ9UQN3 213 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 RAXQ9Y2V3 346 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 COQ6Q9Y2Z9 468 aa9.11□□□□□ -0.95
IDH3A-217ENST00000559889 NEMP2A6NFY4 417 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 GCATO75600 419 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 PRKCGP05129 697 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 ZFXP17010 805 aaPredicted RBP9.1□□□□□ -0.95
IDH3A-217ENST00000559889 JUNDP17535 347 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 MMP12P39900 470 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 YPEL5P62699 121 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 SEMG2Q02383 582 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 SLC10A7Q0GE19 358 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 ELP6Q0PNE2 266 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 RFTN1Q14699 578 aaPredicted RBP9.1□□□□□ -0.95
IDH3A-217ENST00000559889 IRF4Q15306 451 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 RBFAQ8N0V3 343 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 LZTR1Q8N653 840 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 DCBLD1Q8N8Z6 715 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 CCNYQ8ND76 341 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 PSKH2Q96QS6 385 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 CSNK1G3Q9Y6M4 447 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 BPTFQ12830 3046 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 ACACAQ13085 2346 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 AQP9O43315 295 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 MAFKO60675 156 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 TCEA3O75764 348 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 VIMP08670 466 aaKnown RBP9.1□□□□□ -0.95
IDH3A-217ENST00000559889 ABHD2P08910 425 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 C6P13671 934 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 PHBP35232 272 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 HNF1BP35680 557 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 ELK3P41970 407 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 LIG3P49916 1009 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 GPX6P59796 221 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 AP1B1Q10567 949 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 RALGDSQ12967 914 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 EFTUD2Q15029 972 aaKnown RBP eCLIP9.1□□□□□ -0.95
IDH3A-217ENST00000559889 AGERQ15109 404 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 TNFAIP8L3Q5GJ75 292 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 NCBP2-AS2Q69YL0 99 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 CDKL3Q8IVW4 592 aaPredicted RBP9.1□□□□□ -0.95
IDH3A-217ENST00000559889 CACTIN-AS1Q8N1I8 211 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 PGBD5Q8N414 524 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 GDAP1Q8TB36 358 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 LGMNQ99538 433 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 PAIP2Q9BPZ3 127 aaKnown RBP9.1□□□□□ -0.95
IDH3A-217ENST00000559889 CINPQ9BW66 212 aaPredicted RBP9.1□□□□□ -0.95
IDH3A-217ENST00000559889 ATP13A3Q9H7F0 1226 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 SP110Q9HB58 689 aa9.1□□□□□ -0.95
IDH3A-217ENST00000559889 DTLQ9NZJ0 730 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms