RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 HSH2DQ96JZ2 352 aa5.8□□□□□ -1.48
USP3-215ENST00000559771 SMIM14Q96QK8 99 aa5.8□□□□□ -1.48
USP3-215ENST00000559771 ERGIC2Q96RQ1 377 aa5.8□□□□□ -1.48
USP3-215ENST00000559771 SNRNP25Q9BV90 132 aaKnown RBP5.8□□□□□ -1.48
USP3-215ENST00000559771 GSX2Q9BZM3 304 aa5.8□□□□□ -1.48
USP3-215ENST00000559771 CATSPERBQ9H7T0 1116 aa5.8□□□□□ -1.48
USP3-215ENST00000559771 CBX8Q9HC52 389 aa5.8□□□□□ -1.48
USP3-215ENST00000559771 STARD5Q9NSY2 213 aa5.8□□□□□ -1.48
USP3-215ENST00000559771 ETNK2Q9NVF9 386 aa5.8□□□□□ -1.48
USP3-215ENST00000559771 LRIT1Q9P2V4 623 aa5.8□□□□□ -1.48
USP3-215ENST00000559771 PISDQ9UG56 409 aa5.8□□□□□ -1.48
USP3-215ENST00000559771 AP4E1Q9UPM8 1137 aa5.8□□□□□ -1.48
USP3-215ENST00000559771 DOLKQ9UPQ8 538 aa5.8□□□□□ -1.48
USP3-215ENST00000559771 PLEKHM1Q9Y4G2 1056 aa5.8□□□□□ -1.48
USP3-215ENST00000559771 LOXL2Q9Y4K0 774 aa5.8□□□□□ -1.48
USP3-215ENST00000559771 HECTD1Q9ULT8 2610 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 FLNCQ14315 2725 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 PRSS38A1L453 326 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 B4DGG1 531 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.79□□□□□ -1.48
USP3-215ENST00000559771 TMX2-CTNND1H3BSU7 103 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 EEF2KO00418 725 aaKnown RBP5.79□□□□□ -1.48
USP3-215ENST00000559771 PPM1DO15297 605 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 TEX33O43247 280 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 SLC28A2O43868 658 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 LRCH4O75427 683 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 PALMO75781 387 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 WISP1O95388 367 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 SOD1P00441 154 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 TUBB4AP04350 444 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 FAM87AP0C7U9 286 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 LIPCP11150 499 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 FGF3P11487 239 aaPredicted RBP5.79□□□□□ -1.48
USP3-215ENST00000559771 CCL4P13236 92 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 ATP1A3P13637 1013 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 XPAP23025 273 aaPredicted RBP5.79□□□□□ -1.48
USP3-215ENST00000559771 AK4P27144 223 aaPredicted RBP5.79□□□□□ -1.48
USP3-215ENST00000559771 IL1R2P27930 398 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 HTR1BP28222 390 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 CD1CP29017 333 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 SERPINA4P29622 427 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 MIPP30301 263 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 CSF2RBP32927 897 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 HTR7P34969 479 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 POLD2P49005 469 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 ZNF75DP51815 510 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 GSDMDP57764 484 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 OR1D5P58170 312 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 TPI1P60174 286 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 IL10RBQ08334 325 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 NFATC3Q12968 1075 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 GRM3Q14832 879 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 CLCA4Q14CN2 919 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 IQCB1Q15051 598 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 CNGA3Q16281 694 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 TBR1Q16650 682 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 ERMARDQ5T6L9 678 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 TXNRD3NBQ6F5E7 133 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 ERAP2Q6P179 960 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 TTLL10Q6ZVT0 673 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 HSD11B1LQ7Z5J1 315 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 TAF8Q7Z7C8 310 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 JAMLQ86YT9 394 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 NAGSQ8N159 534 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 OR6C4Q8NGE1 309 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 SCG3Q8WXD2 468 aaKnown RBP5.79□□□□□ -1.48
USP3-215ENST00000559771 USP7Q93009 1102 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 SGF29Q96ES7 293 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 TMEM74Q96NL1 305 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 NAP1L5Q96NT1 182 aaPredicted RBP5.79□□□□□ -1.48
USP3-215ENST00000559771 PSKH2Q96QS6 385 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 NCAPGQ9BPX3 1015 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 NUDT22Q9BRQ3 303 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 TEX101Q9BY14 249 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 FRMD8Q9BZ67 464 aaPredicted RBP5.79□□□□□ -1.48
USP3-215ENST00000559771 TRIM5Q9C035 493 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 STRADBQ9C0K7 418 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 DHX35Q9H5Z1 703 aaKnown RBP5.79□□□□□ -1.48
USP3-215ENST00000559771 ATP13A3Q9H7F0 1226 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 RDH14Q9HBH5 336 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 CYP4F12Q9HCS2 524 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 KCND1Q9NSA2 647 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 CWC15Q9P013 229 aaKnown RBP5.79□□□□□ -1.48
USP3-215ENST00000559771 IMPACTQ9P2X3 320 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 B4GALT6Q9UBX8 382 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 PCSK1NQ9UHG2 260 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 PCYT1BQ9Y5K3 369 aaPredicted RBP5.79□□□□□ -1.48
USP3-215ENST00000559771 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.79□□□□□ -1.48
USP3-215ENST00000559771 MAST4O15021 2626 aa5.79□□□□□ -1.48
USP3-215ENST00000559771 ZFC3H1O60293 1989 aaKnown RBP5.78□□□□□ -1.48
USP3-215ENST00000559771 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.78□□□□□ -1.48
USP3-215ENST00000559771 IGHV5-10-1A0A0J9YXX1 117 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 NPIPB15A6NHN6 443 aaPredicted RBP5.78□□□□□ -1.48
USP3-215ENST00000559771 ARHGAP42A6NI28 874 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 TMCO5BA8MYB1 307 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 DFFAO00273 331 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 CACNB4O00305 520 aaPredicted RBP5.78□□□□□ -1.48
USP3-215ENST00000559771 DDX3XO00571 662 aaKnown RBP eCLIP5.78□□□□□ -1.48
USP3-215ENST00000559771 DYNC1I1O14576 645 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 SUV39H1O43463 412 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms